RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 SNRPD2P62316 118 aaKnown RBP4.82□□□□□ -1.64
SSX1-201ENST00000376919 GAGE2BQ13066 116 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 PTGES3Q15185 160 aaKnown RBP4.82□□□□□ -1.64
SSX1-201ENST00000376919 ZNF672Q499Z4 452 aaPredicted RBP4.82□□□□□ -1.64
SSX1-201ENST00000376919 GAGE2EQ4V326 116 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 PABPC1L2AQ5JQF8 200 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 FAM27BQ5VT28 67 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 AGAP6Q5VW22 663 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 OTPQ5XKR4 325 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 GAGE2AQ6NT46 116 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 ZNF774Q6NX45 483 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 FAHD1Q6P587 224 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 MEPCEQ7L2J0 689 aaKnown RBP4.82□□□□□ -1.64
SSX1-201ENST00000376919 GID4Q8IVV7 300 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 OR6V1Q8N148 313 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 PARP8Q8N3A8 854 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 ACBD4Q8NC06 268 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 CSNK2A3Q8NEV1 391 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 OR4F15Q8NGB8 312 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 RNASE8Q8TDE3 154 aaKnown RBP4.82□□□□□ -1.64
SSX1-201ENST00000376919 C11orf40Q8WZ69 217 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 NRGNQ92686 78 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 PIGTQ969N2 578 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 SLC25A28Q96A46 364 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 NABP1Q96AH0 204 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 FBXO17Q96EF6 278 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 RITA1Q96K30 269 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 C8orf49Q96NF6 230 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 PITX2Q99697 317 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 COPS4Q9BT78 406 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 ZNF416Q9BWM5 594 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 OR2H1Q9GZK4 316 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 VCX3BQ9H321 246 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 MED20Q9H944 212 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 NOX3Q9HBY0 568 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 GAGE2DQ9UEU5 116 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 RNF150Q9ULK6 438 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 B9D1Q9UPM9 204 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 UGT2A1Q9Y4X1 527 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 TIMM10BQ9Y5J6 103 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 GMPPBQ9Y5P6 360 aa4.82□□□□□ -1.64
SSX1-201ENST00000376919 CADP27708 2225 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 APCP25054 2843 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 IGLV1-36A0A0B4J1U3 117 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 IGHV2OR16-5A0A0B4J2B6 119 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 SNTNA6NMZ2 147 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 J3QR06 171 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 M0R129 80 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 DCTN6O00399 190 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 CTDSPLO15194 276 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 XRCC3O43542 346 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 TLX2O43763 284 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 MRPL3P09001 348 aaKnown RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZNF14P17017 642 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 CALCRP30988 508 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 NAA10P41227 235 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 ENTPD1P49961 510 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZNF133P52736 654 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 SLC25A1P53007 311 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 KRTAP10-9P60411 292 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 LSM6P62312 80 aaKnown RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 ELF3P78545 371 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 DLK1P80370 383 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 CDK5Q00535 292 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 UBE2V1Q13404 147 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 APOFQ13790 326 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 EIF2B1Q14232 305 aaKnown RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 ENDOGQ14249 297 aaKnown RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 RAB35Q15286 201 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 LPCAT4Q643R3 524 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 KDM4DQ6B0I6 523 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ACSM5Q6NUN0 579 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZNF544Q6NX49 715 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 CORO6Q6QEF8 472 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 UGT2A3Q6UWM9 527 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 MYPOPQ86VE0 399 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 MUC15Q8N387 334 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 NPEPL1Q8NDH3 523 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 SLC26A10Q8NG04 563 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 OR1J1Q8NGS3 322 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 TMEM163Q8TC26 289 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 SMAP2Q8WU79 429 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 THEM6Q8WUY1 208 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 CYGBQ8WWM9 190 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 LINC00476Q8WZB0 136 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 NEUROG1Q92886 237 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 SPTSSAQ969W0 71 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZMYND19Q96E35 227 aaPredicted RBP4.81□□□□□ -1.64
SSX1-201ENST00000376919 ZNF503Q96F45 646 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 GRAMD2BQ96HH9 432 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 IL4I1Q96RQ9 567 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 ATF6BQ99941 703 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 APOL4Q9BPW4 351 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 DHRS9Q9BPW9 319 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 WACQ9BTA9 647 aa4.81□□□□□ -1.64
SSX1-201ENST00000376919 GABARAPL3Q9BY60 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms