RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ANKRD10Q9NXR5 420 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 SERPINE3A8MV23 424 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 IL9P15248 144 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 PPP1CBP62140 327 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 KIAA0040Q15053 153 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 GUK1Q16774 197 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF429Q86V71 674 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 LSRQ86X29 649 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 SIRT6Q8N6T7 355 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 LINC01555Q8NAE3 123 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 OR4S1Q8NGB4 309 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 CCDC74BQ96LY2 380 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEFF2Q9UIK5 374 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 FOXJ3Q9UPW0 622 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 CASP8AP2Q9UKL3 1982 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 PMP22Q01453 160 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 TOMM34Q15785 309 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 IQCJQ1A5X6 159 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 SLC38A6Q8IZM9 456 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 NUDT9Q9BW91 350 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 EGLN1Q9GZT9 426 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 ARRDC1-AS1Q9H2J1 176 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 CCDC187A0A096LP49 1063 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 ASPDHA6ND91 283 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 ICOSLGO75144 302 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 FABP4P15090 132 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 F2RP25116 425 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 MAMSTRQ6ZN01 415 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 CALHM3Q86XJ0 350 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 NHLRC2Q8NBF2 726 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 OR8D4Q8NGM9 314 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 FBXO34Q9NWN3 711 aa11.04□□□□□ -0.64
NPLOC4-202ENST00000374747 NYNRINQ9P2P1 1898 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 CST4P01036 141 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 MMP7P09237 267 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ARR3P36575 388 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 RAG2P55895 527 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 PINX1Q96BK5 328 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 OXGR1Q96P68 337 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 IP6K3Q96PC2 410 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 NDFIP1Q9BT67 221 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 PLEKHB1Q9UF11 243 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 A0A1W2PNR3 127 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 HSBP1O75506 76 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 WISP3O95389 354 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 NXPH1P58417 271 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 AGERQ15109 404 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 MIDNQ504T8 468 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ZNF628Q5EBL2 1059 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 C8orf82Q6P1X6 216 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 C19orf35Q6ZS72 473 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ABI3BPQ7Z7G0 1075 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 C16orf52Q8NHV5 167 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 TMEM9BQ9NQ34 198 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 MED29Q9NX70 200 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 CLEC18AA5D8T8 446 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 AVPR2P30518 371 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 NOVA1P51513 510 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 RPS23P62266 143 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 IL10RAQ13651 578 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 CARFQ8N187 725 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ZDHHC22Q8N966 263 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 CLEC18CQ8NCF0 446 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ARSGQ96EG1 525 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 PARD6AQ9NPB6 346 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 ST3GAL6Q9Y274 331 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 G0S2P27469 103 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 S1PR3Q99500 378 aa11.03□□□□□ -0.64
NPLOC4-202ENST00000374747 NRG2O14511 850 aaPredicted RBP11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 GREM1O60565 184 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 GALP22466 123 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 EMDP50402 254 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 RAE1P78406 368 aaKnown RBP11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 PJVKQ0ZLH3 352 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 OR10D4PQ8NGN7 298 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 AKR7LQ8NHP1 331 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 ERGIC1Q969X5 290 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 PRRX2Q99811 253 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 COMMD5Q9GZQ3 224 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 FBXO4Q9UKT5 387 aa11.02□□□□□ -0.64
NPLOC4-202ENST00000374747 DICER1Q9UPY3 1922 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 ZNF17P17021 662 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 HLXQ14774 488 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 NKG7Q16617 165 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 OR2W3Q7Z3T1 314 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 ZPBPQ9BS86 351 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 SLC52A3Q9NQ40 469 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 ING1Q9UK53 422 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-202ENST00000374747 B9D1Q9UPM9 204 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms