RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 LINC00854A0A1B0GVQ3 168 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 ANKRD30BLA7E2S9 258 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 KDM4BO94953 1096 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 PRDX4Q13162 271 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 SPATA46Q5T0L3 261 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 ZNF57Q68EA5 555 aaPredicted RBP22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 ZDHHC23Q8IYP9 409 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 RELL2Q8NC24 303 aaPredicted RBP22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 FCAMRQ8WWV6 532 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 YIPF5Q969M3 257 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 BCL2L14Q9BZR8 327 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 OR2J1Q9GZK6 312 aa22.62■■□□□ 1.21
ATPAF1-202ENST00000371937 TRAV18A0A075B6X5 111 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 RAC2P15153 192 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 MYO7BQ6PIF6 2116 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 GPR160Q9UJ42 338 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 MPC1Q9Y5U8 109 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 ITPR1Q14643 2758 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 ATRXP46100 2492 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 C16orf97H3BN30 126 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 ZP1P60852 638 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 CEACAM21Q3KPI0 293 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 SLC22A6Q4U2R8 563 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 CDH24Q86UP0 819 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 CMBLQ96DG6 245 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 CCDC120Q96HB5 630 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 HIST1H2AAQ96QV6 131 aa22.61■■□□□ 1.21
ATPAF1-202ENST00000371937 IGHV2OR16-5A0A0B4J2B6 119 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 LANCL1O43813 399 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 CD3GP09693 182 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 TMEM225BP0DP42 221 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 SELEP16581 610 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 OR2T2Q6IF00 324 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 SLC25A40Q8TBP6 338 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 GAL3ST1Q99999 423 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 TMEM59Q9BXS4 323 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 SLC22A4Q9H015 551 aa22.6■■□□□ 1.21
ATPAF1-202ENST00000371937 IGKV1-27A0A075B6S5 117 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 PLA2G10O15496 165 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 CDC14BO60729 498 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 CRTAPO75718 401 aaPredicted RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 ZNF83P51522 516 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 MZT2BQ6NZ67 158 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 GDPD3Q7L5L3 318 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 SSX8Q7RTT4 187 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 C1QL2Q7Z5L3 287 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 BHLHE23Q8NDY6 225 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 URM1Q9BTM9 101 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 PKD1L2Q7Z442 2459 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 MPIG6BO95866 241 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 CHRM2P08172 466 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 NAAAQ02083 359 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 RNASE12Q5GAN4 147 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 PCSK4Q6UW60 755 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 TMEM104Q8NE00 496 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 ITPKCQ96DU7 683 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 NUDT16L1Q9BRJ7 211 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 C11orf54Q9H0W9 315 aaPredicted RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 OR10A4Q9H209 315 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 MRPL15Q9P015 296 aaKnown RBP22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 OSGIN2Q9Y236 505 aa22.59■■□□□ 1.21
ATPAF1-202ENST00000371937 POLEQ07864 2286 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 GPR176Q14439 515 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 TOMM5Q8N4H5 51 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 ACBD4Q8NC06 268 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 OR5A2Q8NGI9 324 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 OR52I2Q8NH67 350 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 METTL9Q9H1A3 318 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 AUNIPQ9H7T9 357 aa22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 ELL3Q9HB65 397 aaPredicted RBP22.58■■□□□ 1.21
ATPAF1-202ENST00000371937 SHANK1Q9Y566 2161 aa22.58■■□□□ 1.2
ATPAF1-202ENST00000371937 M0R1B8 84 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 RAB27BO00194 218 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 ZNF780AO75290 641 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 ERVS71-1P61550 626 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 KLF14Q8TD94 323 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 MARS2Q96GW9 593 aaKnown RBP22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 LPAR5Q9H1C0 372 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 PQLC2LA1A4F0 135 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 LYRM1O43325 122 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 PRSS3P35030 304 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 PDZK1IP1Q13113 114 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 ALKBH2Q6NS38 261 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 ASCL4Q6XD76 172 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 DNM1P46Q6ZS02 220 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 NRARPQ7Z6K4 114 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 PXT1Q8NFP0 134 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 GCDHQ92947 438 aaPredicted RBP22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 BANF2Q9H503 90 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 CRIM1Q9NZV1 1036 aa22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 RBMX2Q9Y388 322 aaKnown RBP22.57■■□□□ 1.2
ATPAF1-202ENST00000371937 TPRP12270 2363 aaKnown RBP22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 CCL21O00585 134 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 ORC5O43913 435 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 CRYAAP02489 173 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 CALCRP30988 508 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 CCKARP32238 428 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 GDNFP39905 211 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 VEGFCP49767 419 aa22.56■■□□□ 1.2
ATPAF1-202ENST00000371937 RSU1Q15404 277 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms