RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 COMMD1Q8N668 190 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 OR5R1Q8NH85 324 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 PATE1Q8WXA2 126 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 THRSPQ92748 146 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 HEBP2Q9Y5Z4 205 aa10.27□□□□□ -0.77
SMARCA1-201ENST00000371121 A0A087WWC5 75 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 A8MVM7 634 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 TCAPO15273 167 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF205O95201 554 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 SFTPCP11686 197 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 RNH1P13489 461 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 EFNA3P52797 238 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 RAB1AP62820 205 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 DLK1P80370 383 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF117Q03924 483 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 CHAF1BQ13112 559 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 LCN10Q6JVE6 187 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 OPN5Q6U736 354 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 OR6X1Q8NH79 312 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 FAM212BQ9NTI7 297 aaPredicted RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 IGKV1-9A0A0C4DH69 117 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 A0A1W2PP55 124 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 H0Y8X5 98 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 PQBP1O60828 265 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 S100A2P29034 98 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 EMP2P54851 167 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 IGLV3-21P80748 117 aaPredicted RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 ICAM4Q14773 271 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 REEP6Q96HR9 211 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 ZFYVE21Q9BQ24 234 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 MEGF11A6BM72 1044 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 DHRS7CA6NNS2 312 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 CYB5BO43169 146 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 XRCC2O43543 280 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 HEXBP07686 556 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 CSF2RAP15509 400 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 FUT7Q11130 342 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 NUP54Q7Z3B4 507 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 TMEM171Q8WVE6 324 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 DECR2Q9NUI1 292 aa10.26□□□□□ -0.77
SMARCA1-201ENST00000371121 CDRT15L2A8MXV6 281 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 DXOO77932 396 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 KNG1P01042 644 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 IFNA10P01566 189 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 EPHA1P21709 976 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF674Q2M3X9 581 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 PACRGQ96M98 296 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 SNHG12Q9BXW3 62 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 KCNJ16Q9NPI9 418 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 TCFL5Q9UL49 500 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 MCTS1Q9ULC4 181 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 LSM5Q9Y4Y9 91 aaKnown RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 ZNF587BE7ETH6 402 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 RAB38P57729 211 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 C14orf28Q4W4Y0 310 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 POMZP3Q6PJE2 187 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 GRASPQ7Z6J2 395 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 SLC22A24Q8N4F4 322 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 BAHD1Q8TBE0 780 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 OR10A5Q9H207 317 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 TLCD2A6NGC4 264 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 CRYM-AS1A6NIL9 109 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 HPNP05981 417 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 DBHP09172 617 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 FUT3P21217 361 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 MDKP21741 143 aaPredicted RBP10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 PLA2G5P39877 138 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 DEFB110Q30KQ9 67 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 GLIPR1L1Q6UWM5 242 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 OR1E3Q8WZA6 343 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 NELFAQ9H3P2 528 aa10.25□□□□□ -0.77
SMARCA1-201ENST00000371121 PRSS38A1L453 326 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 ETV2O00321 342 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 PTBP3O95758 552 aaKnown RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 PET100P0DJ07 73 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 PGA4P0DJD7 388 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 PGA5P0DJD9 388 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 WASP42768 502 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 GLIPR1P48060 266 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 MMP16P51512 607 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 CCR4P51679 360 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 TNFRSF9Q07011 255 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 PRSS8Q16651 343 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 C4orf17Q53FE4 359 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 TMEM182Q6ZP80 229 aaPredicted RBP10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 Q6ZPA2 131 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 FAM89BQ8N5H3 189 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 S100A13Q99584 98 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 ST6GALNAC5Q9BVH7 336 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 OR11A1Q9GZK7 315 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 DIRAS3O95661 229 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 IGHMP01871 453 aa10.24□□□□□ -0.77
SMARCA1-201ENST00000371121 AMBPP02760 352 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms