RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NPTNQ9Y639 398 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 HLA-BQ31612 363 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 F5H697 171 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 MOGAT2Q3SYC2 334 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 CNRIP1Q96F85 164 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-202ENST00000359082 TMEM272A0A1B0GTI8 110 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ALG1L2C9J202 215 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 CCR2P41597 374 aa16.49■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF574Q6ZN55 896 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-202ENST00000359082 MRGPREQ86SM8 312 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 ADAM20O43506 726 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 FCGR3BO75015 233 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 PNPP00491 289 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 AVPR2P30518 371 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 TMEM97Q5BJF2 176 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 KMT5CQ86Y97 462 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 TRAV1-2A0A0B4J238 106 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 FAM90A27PA6NNH2 459 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 FABP4P15090 132 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 CDC14BO60729 498 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 TMEM147Q9BVK8 224 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 WDR61Q9GZS3 305 aaKnown RBP16.48■□□□□ 0.23
SHANK1-202ENST00000359082 MYOZ1Q9NP98 299 aaPredicted RBP16.48■□□□□ 0.23
SHANK1-202ENST00000359082 CA6P23280 308 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 GALR1P47211 349 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 HNRNPA3P51991 378 aaKnown RBP16.48■□□□□ 0.23
SHANK1-202ENST00000359082 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 C11orf87Q6NUJ2 197 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 ANKRD33Q7Z3H0 272 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 TGIF2LXQ8IUE1 241 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF561Q8N587 486 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 NPEPL1Q8NDH3 523 aa16.48■□□□□ 0.23
SHANK1-202ENST00000359082 NQO2P16083 231 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 MMP15P51511 669 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 FAM53BQ14153 422 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 TMEM196Q5HYL7 178 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF680Q8NEM1 530 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 VAMP8Q9BV40 100 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 KLK10O43240 276 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 SDHBP21912 280 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 MEOX1P50221 254 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 MIDNQ504T8 468 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 SLC16A12Q6ZSM3 486 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 WDR31Q8NA23 367 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 C20orf141Q9NUB4 165 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 SERPINE3A8MV23 424 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 PPIHO43447 177 aaKnown RBP16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OPN1MWP04001 364 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OPN1MW2P0DN77 364 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OPN1MW3P0DN78 364 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 Q6ZNB5 142 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 IGHV3-43A0A0B4J1X8 118 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 IGHV3-43DP0DP04 118 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 PAX5Q02548 391 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 ZNF784Q8NCA9 323 aaPredicted RBP16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OR4F17Q8NGA8 305 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OTOSQ8NHW6 89 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 BMI1P35226 326 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 SUMO3P55854 103 aaPredicted RBP16.47■□□□□ 0.23
SHANK1-202ENST00000359082 OCEL1Q9H607 264 aa16.47■□□□□ 0.23
SHANK1-202ENST00000359082 RNASEK-C17orf49H0YIS7 233 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 FOXB2Q5VYV0 432 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 NRAPQ86VF7 1730 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 BMP5P22003 454 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 TMEM128Q5BJH2 165 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 KLHDC1Q8N7A1 406 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 LINC01465Q8N7H1 131 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 OR1L4Q8NGR5 311 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 NXF2Q9GZY0 626 aaKnown RBP16.46■□□□□ 0.23
SHANK1-202ENST00000359082 CYR61O00622 381 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 ABCD3P28288 659 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 OR4C3Q8NH37 302 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 A0A1W2PNV4 684 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 EPHA2P29317 976 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 LYG1Q8N1E2 194 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 CACFD1Q9UGQ2 172 aa16.46■□□□□ 0.23
SHANK1-202ENST00000359082 FPR2P25090 351 aa16.46■□□□□ 0.22
SHANK1-202ENST00000359082 FMODQ06828 376 aa16.46■□□□□ 0.22
SHANK1-202ENST00000359082 MICBQ29980 383 aa16.46■□□□□ 0.22
SHANK1-202ENST00000359082 TMEM56Q96MV1 263 aa16.46■□□□□ 0.22
SHANK1-202ENST00000359082 PSG11Q9UQ72 335 aa16.46■□□□□ 0.22
SHANK1-202ENST00000359082 NGFP01138 241 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 TNFRSF1AP19438 455 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 ZNF117Q03924 483 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 SSBP1Q04837 148 aaKnown RBP16.45■□□□□ 0.22
SHANK1-202ENST00000359082 Q6ZS52 159 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 RPEQ96AT9 228 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-202ENST00000359082 DOK5Q9P104 306 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 N4BP2Q86UW6 1770 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-202ENST00000359082 LPAR6P43657 344 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 CDC34P49427 236 aaPredicted RBP16.45■□□□□ 0.22
SHANK1-202ENST00000359082 ARHGAP5-AS1Q96IT6 56 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 PHOX2AO14813 284 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 PTHLHP12272 177 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 GPR3P46089 330 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 BTLAQ7Z6A9 289 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 TUBAL3A6NHL2 446 aa16.45■□□□□ 0.22
SHANK1-202ENST00000359082 FZD6O60353 706 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms