RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 LOC389332A0A1B0GUA5 103 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 OR4C46A6NHA9 309 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 CA6P23280 308 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 SLC51BQ86UW2 128 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 OR4C3Q8NH37 302 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 ARRDC2Q8TBH0 407 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 TMEM18Q96B42 140 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 MS4A8Q9BY19 250 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 SLC26A1Q9H2B4 701 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 SRD5A3Q9H8P0 318 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 TNFAIP6P98066 277 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-201ENST00000356083 FCN2Q15485 313 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 KLHDC1Q8N7A1 406 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 ZNF784Q8NCA9 323 aaPredicted RBP15.58■□□□□ 0.08
COL27A1-201ENST00000356083 OR52I2Q8NH67 350 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 FLYWCH2Q96CP2 140 aaKnown RBP15.58■□□□□ 0.08
COL27A1-201ENST00000356083 SLC7A10Q9NS82 523 aa15.58■□□□□ 0.08
COL27A1-201ENST00000356083 SCG5P05408 212 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 OR4A8P0C604 315 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 OSR2Q8N2R0 312 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 ZFAND2BQ8WV99 257 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 THYN1Q9P016 225 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 ANKRD53Q8N9V6 530 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 COL2A1P02458 1487 aaPredicted RBP15.57■□□□□ 0.08
COL27A1-201ENST00000356083 FAHP16930 419 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 SPI1P17947 270 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 OR1C1Q15619 314 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 TMEM108Q6UXF1 575 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 EVA1AQ9H8M9 152 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 LIPGQ9Y5X9 500 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 TO15178 435 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 HIST1H3AP68431 136 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 NDUFB11Q9NX14 153 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 OR5V1Q9UGF6 321 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 NAT8BQ9UHF3 227 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 TBX19O60806 448 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 UBL3O95164 117 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 CST5P28325 142 aaPredicted RBP15.57■□□□□ 0.08
COL27A1-201ENST00000356083 OR2A2Q6IF42 318 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 SLC48A1Q6P1K1 146 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 ADAMTSL4Q6UY14 1074 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 KCTD12Q96CX2 325 aaKnown RBP15.57■□□□□ 0.08
COL27A1-201ENST00000356083 HS3ST3A1Q9Y663 406 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 WIPI1Q5MNZ9 446 aaPredicted RBP15.57■□□□□ 0.08
COL27A1-201ENST00000356083 IL17BQ9UHF5 180 aa15.57■□□□□ 0.08
COL27A1-201ENST00000356083 COL3A1P02461 1466 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 LINC01553A4QN01 128 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 DSCR3O14972 297 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 ETV1P50549 477 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 B2MP61769 119 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 C19orf57Q0VDD7 668 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 PTPMT1Q8WUK0 201 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 CBR3O75828 277 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 CD82P27701 267 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 SNRPNP63162 240 aaKnown RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 TBC1D26Q86UD7 250 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 MARCH1Q8TCQ1 289 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 UBQLN3Q9H347 655 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 VSIG4Q9Y279 399 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 DNAJC25-GNG10A0A024R161 153 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 SP6Q3SY56 376 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 NKAIN4Q8IVV8 208 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 NUDCD2Q8WVJ2 157 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 RTN4IP1Q8WWV3 396 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 GNPNAT1Q96EK6 184 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 SCN5AQ14524 2016 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 CGB1A6NKQ9 187 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 DRGXA6NNA5 263 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 RPL12P30050 165 aaKnown RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 OR3A1P47881 315 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 TNXAQ16473 311 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 FAHD2BQ6P2I3 314 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 FAHD2AQ96GK7 314 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 PACRGQ96M98 296 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 OXGR1Q96P68 337 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 FAM53CQ9NYF3 392 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 A4GNTQ9UNA3 340 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 ACTL6AO96019 429 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 C20orf196Q8IYI0 205 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 SLC38A6Q8IZM9 456 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 OR1N2Q8NGR9 330 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 RTN4RQ9BZR6 473 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 AMMECR1Q9Y4X0 333 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 FKBP2P26885 142 aaKnown RBP15.56■□□□□ 0.08
COL27A1-201ENST00000356083 TMEM37Q8WXS4 190 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 NEURL3Q96EH8 262 aa15.56■□□□□ 0.08
COL27A1-201ENST00000356083 GNG4P50150 75 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 RBPMSQ93062 196 aaKnown RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 GPX7Q96SL4 187 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 CCKARP32238 428 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 CEACAM16Q2WEN9 425 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PELI1Q96FA3 418 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PCNX1Q96RV3 2341 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 MED19A0JLT2 244 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-201ENST00000356083 E5RGE8 158 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 PPOXP50336 477 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 SLC22A13Q9Y226 551 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 NSG2Q9Y328 171 aa15.55■□□□□ 0.08
COL27A1-201ENST00000356083 N4BP2Q86UW6 1770 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms