RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 FAM71F1Q96KD3 344 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 PINK1Q9BXM7 581 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 A3GALT2U3KPV4 340 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZNF207O43670 478 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 STX11O75558 287 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 FARS2O95363 451 aaKnown RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 RLN1P04808 185 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 UMODP07911 640 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 HCKP08631 526 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 GP1BBP13224 206 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 AMY2BP19961 511 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 PPT1P50897 306 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 TFF3Q07654 80 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 CHRFAM7AQ494W8 412 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ERICH5Q6P6B1 374 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SUMF2Q8NBJ7 301 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 RXFP4Q8TDU9 374 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 LCORQ96JN0 433 aaPredicted RBP4.8□□□□□ -1.64
CD47-201ENST00000355354 YPEL4Q96NS1 127 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SRXN1Q9BYN0 137 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 SLC22A4Q9H015 551 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 ZC4H2Q9NQZ6 224 aa4.8□□□□□ -1.64
CD47-201ENST00000355354 FOXI3A8MTJ6 420 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 OMGP23515 440 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 MYBPHQ13203 477 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 CDC20BQ86Y33 519 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 GLYATL2Q8WU03 294 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 OMA1Q96E52 524 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 SRMSQ9H3Y6 488 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 UNKLQ9H9P5 680 aaKnown RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 PNO1Q9NRX1 252 aaKnown RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 ZNF69Q9UC07 566 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 TRAV20A0A0B4J274 112 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 TRAPPC13A5PLN9 417 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FAM166BA8MTA8 275 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 C17orf105B2RV13 164 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 ZNF736B4DX44 427 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 GOSR2O14653 212 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 EMC8O43402 210 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 DUX1O43812 170 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 KRT75O95678 551 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 GZMHP20718 246 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 S100A5P33763 92 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 GSTM5P46439 218 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 ASMTP46597 345 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PMP22Q01453 160 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 POU3F1Q03052 451 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 QPRTQ15274 297 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 C4orf17Q53FE4 359 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 MRPL14Q6P1L8 145 aaKnown RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 NUDT18Q6ZVK8 323 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 KRTAP1-3Q8IUG1 177 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 CARFQ8N187 725 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 ARRDC1Q8N5I2 433 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 NFAM1Q8NET5 270 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 SLC25A44Q96H78 314 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 CCNL2Q96S94 520 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 A0A096LPE4 126 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 A0A1W2PPZ6 126 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 AIPO00170 330 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FADS1O60427 444 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 TSPAN2O60636 221 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 SPARCP09486 303 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 DNASE1L1P49184 302 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PAX9P55771 341 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PPIAP62937 165 aaKnown RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 ZNF266Q14584 549 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 MPPED2Q15777 294 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 SPATA46Q5T0L3 261 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 TTC23LQ6PF05 361 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 UFD1Q92890 307 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 CXXC4Q9H2H0 198 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 HRH4Q9H3N8 390 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FAM206AQ9NX38 181 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 NSG2Q9Y328 171 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 ATP23Q9Y6H3 246 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FIGNL2A6NMB9 653 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PDCD5O14737 125 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PEX14O75381 377 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 SOD3P08294 240 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FCGR3AP08637 254 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PNMTP11086 282 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 PRKAR1BP31321 381 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 CD80P33681 288 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 BTN2A1Q7KYR7 527 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FAM24BQ8N5W8 94 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 UBAC2Q8NBM4 344 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 OR8B12Q8NGG6 310 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 OR52N1Q8NH53 320 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 LEAP2Q969E1 77 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 FAM3DQ96BQ1 224 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 DTNBP1Q96EV8 351 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 GINS4Q9BRT9 223 aa4.79□□□□□ -1.64
CD47-201ENST00000355354 CRNNQ9UBG3 495 aaPredicted RBP4.79□□□□□ -1.64
CD47-201ENST00000355354 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
CD47-201ENST00000355354 CST7O76096 145 aa4.78□□□□□ -1.64
CD47-201ENST00000355354 PRF1P14222 555 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms