RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SPAARA0A1B0GVQ0 90 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 F5H5P2 479 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 H3BUI4 141 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 CCSO14618 274 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 ARPC5O15511 151 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 HLA-AP01891 365 aaKnown RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 SP1P08047 785 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 MTCP1P56278 107 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 ARF1P84077 181 aaKnown RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 PPP1R1AQ13522 171 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 TMPRSS7Q7RTY8 843 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 C12orf45Q8N5I9 185 aaPredicted RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 OR56B1Q8NGI3 324 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 RADILQ96JH8 1075 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 PRRT1Q99946 306 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 SLC2A8Q9NY64 477 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 ABI3Q9P2A4 366 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 FOXI3A8MTJ6 420 aaPredicted RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 SCGNO76038 276 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 ARFRP1Q13795 201 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 DEFB124Q8NES8 71 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 NUDT16L1Q9BRJ7 211 aaKnown RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 URM1Q9BTM9 101 aaKnown RBP13.53□□□□□ -0.24
MBD1-205ENST00000353909 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
MBD1-205ENST00000353909 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 HLA-HP01893 362 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 GSTP1P09211 210 aaKnown RBP13.52□□□□□ -0.24
MBD1-205ENST00000353909 TMEM225BP0DP42 221 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 EDN3P14138 238 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 ALDH3B1P43353 468 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 EXOSC2Q13868 293 aaKnown RBP13.52□□□□□ -0.24
MBD1-205ENST00000353909 KRTAP27-1Q3LI81 207 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 C6orf201Q7Z4U5 140 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 VASH2Q86V25 355 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 MDS2Q8NDY4 140 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 MARCH1Q8TCQ1 289 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 CCDC107Q8WV48 283 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 DEFB127Q9H1M4 99 aa13.52□□□□□ -0.24
MBD1-205ENST00000353909 SVILO95425 2214 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 MCRIP1C9JLW8 97 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 UBBP0CG47 229 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 NFYAP23511 347 aaPredicted RBP13.52□□□□□ -0.25
MBD1-205ENST00000353909 GABRR1P24046 479 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 PDSS1Q5T2R2 415 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 STEAP2Q8NFT2 490 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 RYDENQ9NUL5 291 aaKnown RBP13.52□□□□□ -0.25
MBD1-205ENST00000353909 PLEKHA6Q9Y2H5 1048 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 SPTBN2O15020 2390 aa13.52□□□□□ -0.25
MBD1-205ENST00000353909 AKAP13Q12802 2813 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 FXYD6-FXYD2A0A087WZ82 144 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 SDCBPO00560 298 aaPredicted RBP13.51□□□□□ -0.25
MBD1-205ENST00000353909 RGS11O94810 467 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 IFNA6P05013 189 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 AKR1C4P17516 323 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 CCNOP22674 350 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 PPIAP62937 165 aaKnown RBP13.51□□□□□ -0.25
MBD1-205ENST00000353909 FAM3AP98173 230 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 SORDQ00796 357 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 RIPPLY1Q0D2K3 151 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 TMEM45BQ96B21 275 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 HDHD3Q9BSH5 251 aaPredicted RBP13.51□□□□□ -0.25
MBD1-205ENST00000353909 FXYD6Q9H0Q3 95 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 M0R233 179 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 NME2P1O60361 137 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 PI3P19957 117 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 NME2P22392 152 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 ZBTB25P24278 435 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 DHODHQ02127 395 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 OPCMLQ14982 345 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 SLC25A42Q86VD7 318 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 ST8SIA4Q92187 359 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 S100A13Q99584 98 aa13.51□□□□□ -0.25
MBD1-205ENST00000353909 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
MBD1-205ENST00000353909 MED12LQ86YW9 2145 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 NPY4RP50391 375 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 BATF2Q8N1L9 274 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 SEC22AQ96IW7 307 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 PECRQ9BY49 303 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 PRRG4Q9BZD6 226 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 IRF2BPLQ9H1B7 796 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 MAP1BP46821 2468 aaKnown RBP13.5□□□□□ -0.25
MBD1-205ENST00000353909 LINC01387J3KSC0 135 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 L7N2F9 121 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 MSTNO14793 375 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 SEC61A1P61619 476 aaKnown RBP13.5□□□□□ -0.25
MBD1-205ENST00000353909 BAMBIQ13145 260 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 TAF9Q16594 264 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 NKAPLQ5M9Q1 402 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 NUFIP2Q7Z417 695 aaKnown RBP13.5□□□□□ -0.25
MBD1-205ENST00000353909 CASTOR1Q8WTX7 329 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 MCTS1Q9ULC4 181 aaKnown RBP13.5□□□□□ -0.25
MBD1-205ENST00000353909 ANAPC10Q9UM13 185 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
MBD1-205ENST00000353909 IGKV1-12A0A0C4DH73 117 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms