RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF705DP0CH99 300 aaPredicted RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 ZNF705BP0CI00 300 aaPredicted RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 PTGER4P35408 488 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 CDKN1BP46527 198 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 VAMP2P63027 116 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 ARMC6Q6NXE6 501 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 MARCH3Q86UD3 253 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 OR13C3Q8NGS6 347 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 SNIP1Q8TAD8 396 aaKnown RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 KIAA1456Q9P272 454 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 TMEM14AQ9Y6G1 99 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 FAM221AA4D161 298 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 A8MXE2 369 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 RRP8O43159 456 aaKnown RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 HLA-DQA2P01906 255 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 CD55P08174 381 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 PRDX1Q06830 199 aaKnown RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 ARHGAP19Q14CB8 494 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 RNF151Q2KHN1 245 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 COX15Q7KZN9 410 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 OR2G3Q8NGZ4 309 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 TMEM37Q8WXS4 190 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 SCGB3A2Q96PL1 93 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 OR8B4Q96RC9 309 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
IFT88-202ENST00000351808 C1orf123Q9NWV4 160 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 DNAJB12Q9NXW2 375 aaKnown RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 ZFP30Q9Y2G7 519 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 A0A1B0GU03 582 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 FIGNL2A6NMB9 653 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 E5RGE8 158 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 VSIG8P0DPA2 414 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 CEACAM1P13688 526 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 FOLR1P15328 257 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 TUBG1P23258 451 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 CTHP32929 405 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 GPR1P46091 355 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 EXOSC7Q15024 291 aaKnown RBP11.71□□□□□ -0.53
IFT88-202ENST00000351808 VAX1Q5SQQ9 334 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 SLC26A10Q8NG04 563 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 OR5H2Q8NGV7 314 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 OTOSQ8NHW6 89 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 SRD5A3Q9H8P0 318 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 TUBD1Q9UJT1 453 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
IFT88-202ENST00000351808 B4DEV8 164 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 HSPB1P04792 205 aaKnown RBP11.71□□□□□ -0.54
IFT88-202ENST00000351808 GATMP50440 423 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 RAB7AP51149 207 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.54
IFT88-202ENST00000351808 UCP3P55916 312 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 SGCGQ13326 291 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 FDX2Q6P4F2 183 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 SPRED2Q7Z698 418 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 STT3BQ8TCJ2 826 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 HLA-CQ95604 372 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 AK3Q9UIJ7 227 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 NAGKQ9UJ70 344 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 RHBDD3Q9Y3P4 386 aa11.71□□□□□ -0.54
IFT88-202ENST00000351808 K7EQS6 105 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 GPR137BO60478 399 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
IFT88-202ENST00000351808 DCAF7P61962 342 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 RPL23AP62750 156 aaKnown RBP11.7□□□□□ -0.54
IFT88-202ENST00000351808 TAF9Q16594 264 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 CCL14Q16627 93 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 CLEC12BQ2HXU8 276 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 OR2A1Q8NGT9 310 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 ALKBH3Q96Q83 286 aaPredicted RBP11.7□□□□□ -0.54
IFT88-202ENST00000351808 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 C20orf202A1L168 122 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 IFNA21P01568 189 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 OPN1MWP04001 364 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 OPN1MW2P0DN77 364 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 OPN1MW3P0DN78 364 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 FSTP19883 344 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 BCKDHBP21953 392 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 RAB11AP62491 216 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
IFT88-202ENST00000351808 GNB2P62879 340 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 SP3Q02447 781 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 FAM53BQ14153 422 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 ALG10Q5BKT4 473 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 RTL6Q6ICC9 239 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 FGGYQ96C11 551 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 FAM122AQ96E09 287 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 LRFN1Q9P244 771 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 LAMP3Q9UQV4 416 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 PPIAL4AQ9Y536 164 aa11.7□□□□□ -0.54
IFT88-202ENST00000351808 CDC14CA4D256 554 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 CCL25O15444 150 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 OR3A2P47893 321 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
IFT88-202ENST00000351808 PRSS8Q16651 343 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms