RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 FAM230AA0A1W2PPH8 454 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 XRCC2O43543 280 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 NRASP01111 189 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CD79AP11912 226 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CCNOP22674 350 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 AGTR1P30556 359 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CLN3Q13286 438 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CNN3Q15417 329 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR8B8Q15620 311 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SCGB2B2Q4G0G5 96 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CLVS2Q5SYC1 327 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 COLCA1Q6ZS62 124 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 HSPB11Q9Y547 144 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MED12LQ86YW9 2145 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 LAMA5O15230 3695 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR14I1A6ND48 311 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 DISC1C4P0D8 188 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MFNGO00587 321 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 AKR7A2O43488 359 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 RAD51DO75771 328 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TMEM225BP0DP42 221 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CCL2P13500 99 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PRKACBP22694 351 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 HRH1P35367 487 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SPICQ8N5J4 248 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 STEAP2Q8NFT2 490 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR11H4Q8NGC9 324 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SPSB4Q96A44 273 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PRRX2Q99811 253 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 POFUT1Q9H488 388 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CA10Q9NS85 328 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PTTG3PQ9NZH4 202 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MGAT4CQ9UBM8 478 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MGAT4AQ9UM21 535 aa12.25□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TRAV17A0A0B4J275 112 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TMEM82A0PJX8 343 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 UBE2QL1A1L167 161 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNHIT1O43257 154 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 IGHG3P01860 377 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 RBP2P50120 134 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SNRPD2P62316 118 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 RAB1AP62820 205 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CXADRP78310 365 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 NLRC3Q7RTR2 1065 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TNRC6AQ8NDV7 1962 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 BORCS8Q96FH0 119 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PRRT1Q99946 306 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ALX4Q9H161 411 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SLC2A8Q9NY64 477 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PLEKHA6Q9Y2H5 1048 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNF175Q9Y473 711 aa12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SPENQ96T58 3664 aaKnown RBP12.24□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNF891A8MT65 544 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ANGPTL7O43827 346 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNF780AO75290 641 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PLATP00750 562 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 COX5BP10606 129 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CPT2P23786 658 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ARR3P36575 388 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PNLIPRP3Q17RR3 467 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 C9orf62Q8N4C0 152 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR2T35Q8NGX2 323 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNF431Q8TF32 576 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SNAPC3Q92966 411 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CPNE2Q96FN4 548 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TM2D1Q9BX74 207 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 CHIAQ9BZP6 476 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 GP6Q9HCN6 339 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PTPRZ1P23471 2315 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ZNF816-ZNF321PA0A0X1KG74 233 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 SPRY1O43609 319 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 WISP2O76076 250 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 IL18BPO95998 194 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 DNASE1P24855 282 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MPGP29372 298 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ARFRP1Q13795 201 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 PIGCQ92535 297 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 LRFN3Q9BTN0 628 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 KCNMB2Q9Y691 235 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 BOD1L1Q8NFC6 3051 aa12.23□□□□□ -0.45
CDK5RAP1-202ENST00000346416 OR4E1P0C645 316 aa12.22□□□□□ -0.45
CDK5RAP1-202ENST00000346416 TBPP20226 339 aa12.22□□□□□ -0.45
CDK5RAP1-202ENST00000346416 MPZP25189 248 aa12.22□□□□□ -0.45
CDK5RAP1-202ENST00000346416 UBE2MP61081 183 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP1-202ENST00000346416 RTP5Q14D33 572 aa12.22□□□□□ -0.45
CDK5RAP1-202ENST00000346416 HIKESHIQ53FT3 197 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms