RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TCRBV5S2A0A599 114 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 M0R082 166 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 OR2J3O76001 311 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 VHLLQ6RSH7 139 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 C12orf54Q6X4T0 127 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 MRGPRX4Q96LA9 322 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM9BQ9NQ34 198 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF835Q9Y2P0 537 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 NPPBP16860 134 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 CD96P40200 585 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 CLLU1OSQ5K130 101 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 BCDIN3DQ7Z5W3 292 aaKnown RBP17.51■□□□□ 0.39
HDAC4-201ENST00000345617 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 HES4Q9HCC6 221 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 BMP5P22003 454 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 ZBTB25P24278 435 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 OR1A1Q9P1Q5 309 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 MRM1Q6IN84 353 aaKnown RBP17.51■□□□□ 0.39
HDAC4-201ENST00000345617 A0A1W2PN81 502 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 BSGP35613 385 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 CHRNA7P36544 502 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 ASCL1P50553 236 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 Q7L0L9 218 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 PRSS3P2Q8NHM4 247 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 RNF167Q9H6Y7 350 aa17.51■□□□□ 0.39
HDAC4-201ENST00000345617 SIAH2O43255 324 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 DEFB133Q30KQ1 61 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 AFMIDQ63HM1 303 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 LRRC3BQ96PB8 259 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 ARID2Q68CP9 1835 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 M0R2Z0 102 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 PSMB2P49721 201 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 FAM3BP58499 235 aaPredicted RBP17.5■□□□□ 0.39
HDAC4-201ENST00000345617 OR52N5Q8NH56 324 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 IGLV3-10A0A075B6K4 115 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 ISLRO14498 428 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM99Q8N816 258 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 SPSB1Q96BD6 273 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 TP53RKQ96S44 253 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 COL22A1Q8NFW1 1626 aaPredicted RBP17.5■□□□□ 0.39
HDAC4-201ENST00000345617 GRPP07492 148 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 OR4F17Q8NGA8 305 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 OR10A7Q8NGE5 316 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 MRPS24Q96EL2 167 aaKnown RBP17.5■□□□□ 0.39
HDAC4-201ENST00000345617 ACKR1Q16570 336 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF738Q8NE65 137 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 SDF2Q99470 211 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.5■□□□□ 0.39
HDAC4-201ENST00000345617 ERVS71-1P61550 626 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 LINC00303Q3SY05 128 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 OXGR1Q96P68 337 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 MMP24Q9Y5R2 645 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 TRGV10A0A0A0MS01 117 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 EFSO43281 561 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 RPL24P83731 157 aaKnown RBP17.5■□□□□ 0.39
HDAC4-201ENST00000345617 CLDN23Q96B33 292 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 PCNX1Q96RV3 2341 aa17.5■□□□□ 0.39
HDAC4-201ENST00000345617 RBFOX3A6NFN3 312 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 SURF2Q15527 256 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-201ENST00000345617 DUSP5Q16690 384 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 TMEM37Q8WXS4 190 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 AUNIPQ9H7T9 357 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 THYN1Q9P016 225 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF256Q9Y2P7 627 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-201ENST00000345617 HDGFL3Q9Y3E1 203 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 DOCK4Q8N1I0 1966 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 MAP1LC3B2A6NCE7 125 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 SUMO3P55854 103 aaPredicted RBP17.49■□□□□ 0.39
HDAC4-201ENST00000345617 CLDN2P57739 230 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 TTC9BQ8N6N2 239 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 OR5M1Q8NGP8 315 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 OIT3Q8WWZ8 545 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 MAP1LC3BQ9GZQ8 125 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 HELTA6NFD8 242 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF345Q14585 488 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 OR1L4Q8NGR5 311 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 TTC9Q92623 222 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 PVRP15151 417 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 RPL18Q07020 188 aaKnown RBP17.49■□□□□ 0.39
HDAC4-201ENST00000345617 ZNF547Q8IVP9 402 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 SP1P08047 785 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 IRS1P35568 1242 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 GSG1Q2KHT4 349 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 OR10AD1Q8NGE0 317 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 OR5C1Q8NGR4 320 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 REC114Q7Z4M0 266 aa17.49■□□□□ 0.39
HDAC4-201ENST00000345617 INHBBP09529 407 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 HIST3H3Q16695 136 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 ADPRHL1Q8NDY3 354 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 HS3ST3A1Q9Y663 406 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 DNPH1O43598 174 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 MPC2O95563 127 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 PTGER1P34995 402 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 MYPOPQ86VE0 399 aaPredicted RBP17.48■□□□□ 0.39
HDAC4-201ENST00000345617 NEURL2Q9BR09 285 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 C5orf52A6NGY3 159 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 SLC6A1P30531 599 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 BCORP1Q8N888 145 aa17.48■□□□□ 0.39
HDAC4-201ENST00000345617 MVB12AQ96EY5 273 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms