RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DPF1Q92782 380 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 LRFN3Q9BTN0 628 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 SIGLEC7Q9Y286 467 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 AMDHD2Q9Y303 409 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 SCN9AQ15858 1988 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 SLC17A2O00624 439 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 OR4E1P0C645 316 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 CCL2P13500 99 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 OR3A4PP47883 348 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ACOT7LQ6ZUV0 252 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 COX14Q96I36 57 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 FBXO34Q9NWN3 711 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 C5orf67F2Z3F1 127 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 DHRS3O75911 302 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 LALBAP00709 142 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 CEACAM6P40199 344 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 RAE1P78406 368 aaKnown RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PMP22Q01453 160 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PRR27Q6MZM9 219 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 TMEM65Q6PI78 240 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 FAM122BQ7Z309 247 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 DUSP21Q9H596 190 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 LRRC3CA6NJW4 275 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PPP5D1E7EU14 171 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF354AO60765 605 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 FGF7P21781 194 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 VN1R4Q7Z5H5 301 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 C2orf50Q96LR7 162 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PLEKHB1Q9UF11 243 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 KPTNQ9Y664 436 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ASCC3Q8N3C0 2202 aaKnown RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 TBX19O60806 448 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PDGFBP01127 241 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 PCBP3P57721 371 aaKnown RBP13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ASAH1Q13510 395 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 ZNF787Q6DD87 383 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 OR52N4Q8NGI2 321 aa13.4□□□□□ -0.26
UBE3B-202ENST00000342494 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-202ENST00000342494 CLPPQ16740 277 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-202ENST00000342494 NUBPLQ8TB37 319 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
UBE3B-202ENST00000342494 DDX60LQ5H9U9 1706 aaKnown RBP13.39□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF727A8MUV8 499 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 SULT1A3P0DMM9 295 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 SULT1A4P0DMN0 295 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 SLC25A4P12235 298 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 TRAT1Q6PIZ9 186 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 ZNF547Q8IVP9 402 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 TMED6Q8WW62 240 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 MISP3Q96FF7 219 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 DERL3Q96Q80 235 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 DUSP15Q9H1R2 295 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-202ENST00000342494 AAMDCQ9H7C9 122 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 PSG11Q9UQ72 335 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 RRASP10301 218 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 RAB7AP51149 207 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 KISS1Q15726 138 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 RASL10BQ96S79 203 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 SLC35D1Q9NTN3 355 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1B0GVG6 124 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 ADGRG7Q96K78 797 aa13.39□□□□□ -0.27
UBE3B-202ENST00000342494 TUBAL3A6NHL2 446 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 FCGR3BO75015 233 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 EPXP11678 715 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 MAGEA5P43359 124 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 RAC3P60763 192 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 RTP5Q14D33 572 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 IL20Q9NYY1 176 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 H3BP45 60 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 FXYD1O00168 92 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 GPNMBQ14956 572 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 LYG2Q86SG7 212 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 CDH26Q8IXH8 852 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 LILRB4Q8NHJ6 448 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 AUNIPQ9H7T9 357 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 TRAV1-2A0A0B4J238 106 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1W2PRD5 423 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1W2PRF3 423 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 A0A1W2PRM7 423 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 EVX1P49640 407 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 C4orf45Q96LM5 186 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 CXXC4Q9H2H0 198 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 AQP8O94778 261 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 ACTL6AO96019 429 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 DCTDP32321 178 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 OPRK1P41145 380 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 ENDOGQ14249 297 aaKnown RBP13.38□□□□□ -0.27
UBE3B-202ENST00000342494 IGFBP7Q16270 282 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 GPR32P1Q8NGA4 272 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 TMEM208Q9BTX3 173 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 CHRDL1Q9BU40 450 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 FLVCR2Q9UPI3 526 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 DNASE2O00115 360 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-202ENST00000342494 PATE4P0C8F1 98 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 C3AR1Q16581 482 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
UBE3B-202ENST00000342494 PXDC1Q5TGL8 231 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms