RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CORINQ9Y5Q5 1042 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ADRA1AP35348 466 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HAAOP46952 286 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 CD226Q15762 336 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 H1FNTQ75WM6 255 aaPredicted RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 MARCH3Q86UD3 253 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ZNF683Q8IZ20 524 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR1B1Q8NGR6 318 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 GPR150Q8NGU9 434 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 KCND3Q9UK17 655 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 A0A096LPE4 126 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 DHRS7CA6NNS2 312 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ACOT8O14734 319 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 TMPRSS11DO60235 418 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 ORM2P19652 201 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 TPBGQ13641 420 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SSX8Q7RTT4 187 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR8D4Q8NGM9 314 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 OR1L6Q8NGR2 347 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 LKAAEAR1Q8TD35 194 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 WSB2Q9NYS7 404 aaPredicted RBP11.63□□□□□ -0.55
USP47-202ENST00000339865 FURINP09958 794 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 HSD11B1LQ7Z5J1 315 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
USP47-202ENST00000339865 PYCARD-AS1I3L0S3 204 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
USP47-202ENST00000339865 CST5P28325 142 aaPredicted RBP11.62□□□□□ -0.55
USP47-202ENST00000339865 SLC37A1P57057 533 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 PTRH1Q86Y79 214 aaKnown RBP11.62□□□□□ -0.55
USP47-202ENST00000339865 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 MBTPS2O43462 519 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 IGSF21Q96ID5 467 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 DEFB127Q9H1M4 99 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 AUNIPQ9H7T9 357 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 TAAR2Q9P1P5 351 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 FMN2Q9NZ56 1722 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 A0A1B0GV72 72 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 DUXBA0A1W2PPF3 345 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 H3BNC9 293 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 EXT1Q16394 746 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 ZNF880Q6PDB4 577 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 EDARADDQ8WWZ3 215 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 DTD2Q96FN9 168 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 NKAIN2Q5VXU1 208 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 DND1Q8IYX4 353 aaKnown RBP11.62□□□□□ -0.55
USP47-202ENST00000339865 C10orf126Q8N4M7 172 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 TMPRSS13Q9BYE2 586 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 RHBDD2Q6NTF9 364 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 TEAD3Q99594 435 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 GLIPR2Q9H4G4 154 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 LIMS3P0CW19 117 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 LIMS4P0CW20 117 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 DIO1P49895 249 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 FAM169BQ8N8A8 192 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 CPPED1Q9BRF8 314 aaPredicted RBP11.62□□□□□ -0.55
USP47-202ENST00000339865 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
USP47-202ENST00000339865 SP1P08047 785 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 EVX1P49640 407 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 C19orf57Q0VDD7 668 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 LILRA2Q8N149 483 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 BCL7CQ8WUZ0 217 aaPredicted RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 CLDN23Q96B33 292 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 TOE1Q96GM8 510 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 HOXA10P31260 410 aaPredicted RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 TMEM128Q5BJH2 165 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 FNDC7Q5VTL7 733 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 SPRED1Q7Z699 444 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 DYNLRB2Q8TF09 96 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 WBP2Q969T9 261 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 SMAD6O43541 496 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 BTF3P20290 206 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 LRRC15Q8TF66 581 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 HAPLN2Q9GZV7 340 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 CSNK1G1Q9HCP0 422 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 MYLKQ15746 1914 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 DIP2BQ9P265 1576 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 DIP2CQ9Y2E4 1556 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 MBLAC1A4D2B0 266 aaPredicted RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 M0R135 149 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 HNRNPA1L2Q32P51 320 aaKnown RBP11.61□□□□□ -0.55
USP47-202ENST00000339865 XKR7Q5GH72 579 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 TRILQ7L0X0 811 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 ZNF799Q96GE5 643 aa11.61□□□□□ -0.55
USP47-202ENST00000339865 ZNF583Q96ND8 569 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms