RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 ZGRF1Q86YA3 2104 aa13.33□□□□□ -0.28
LIMS1-202ENST00000338045 IGKV1-27A0A075B6S5 117 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 A8MXE2 369 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 SMPD2O60906 423 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 SCGNO76038 276 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 PTHLHP12272 177 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 PLA2G5P39877 138 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 RBP2P50120 134 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 FUT6P51993 359 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 MTCP1P56278 107 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 KLF9Q13886 244 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-202ENST00000338045 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
LIMS1-202ENST00000338045 MTFR2Q6P444 385 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 C1QL2Q7Z5L3 287 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 CDH24Q86UP0 819 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 TOMM5Q8N4H5 51 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 TMEM104Q8NE00 496 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 PIGCQ92535 297 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 MED30Q96HR3 178 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 PIGMQ9H3S5 423 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
LIMS1-202ENST00000338045 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
LIMS1-202ENST00000338045 SLC25A15Q9Y619 301 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 ZZEF1O43149 2961 aa13.32□□□□□ -0.28
LIMS1-202ENST00000338045 A0A0G2JNJ9 132 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 CD300LBA8K4G0 201 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 CDC14BO60729 498 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 KIR2DL3P43628 341 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 SRP9P49458 86 aaKnown RBP13.31□□□□□ -0.28
LIMS1-202ENST00000338045 DYRK1AQ13627 763 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 GPR176Q14439 515 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 MOGAT2Q3SYC2 334 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FBXW12Q6X9E4 464 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 DUSP18Q8NEJ0 188 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 TNFAIP8L1Q8WVP5 186 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FAM46BQ96A09 425 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 BORCS8Q96FH0 119 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 Q9UFV3 132 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 SLC7A11Q9UPY5 501 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 MEIOCA2RUB1 952 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FUOMA2VDF0 154 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 TMEM8BA6NDV4 472 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 AGFG2O95081 481 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 ZNF35P13682 527 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FAM189A2Q15884 450 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 PLCXD3Q63HM9 321 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FIP1L1Q6UN15 594 aaKnown RBP13.31□□□□□ -0.28
LIMS1-202ENST00000338045 ASCL4Q6XD76 172 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 MOB3CQ70IA8 216 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FTMTQ8N4E7 242 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 MOV10Q9HCE1 1003 aaKnown RBP13.31□□□□□ -0.28
LIMS1-202ENST00000338045 KLK11Q9UBX7 282 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 CACNG2Q9Y698 323 aa13.31□□□□□ -0.28
LIMS1-202ENST00000338045 FAM230AA0A1W2PPH8 454 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 WIPF3A6NGB9 483 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 ZNF850A8MQ14 1090 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 H7C417 338 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 SULT1C2O00338 296 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 CHRM2P08172 466 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 CECR9P0C854 216 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 BTF3P20290 206 aaKnown RBP13.3□□□□□ -0.28
LIMS1-202ENST00000338045 IL32P24001 234 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 BCAP31P51572 246 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 UCP2P55851 309 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 B2MP61769 119 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 PPP1CBP62140 327 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 SLC22A6Q4U2R8 563 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 MRGPRGQ86SM5 289 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 ACBD4Q8NC06 268 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 GAL3ST1Q99999 423 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 C7orf50Q9BRJ6 194 aaKnown RBP13.3□□□□□ -0.28
LIMS1-202ENST00000338045 PAPOLGQ9BWT3 736 aaKnown RBP13.3□□□□□ -0.28
LIMS1-202ENST00000338045 TMEM59Q9BXS4 323 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 CST11Q9H112 138 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 CRIM1Q9NZV1 1036 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 MTFP1Q9UDX5 166 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 GPR160Q9UJ42 338 aa13.3□□□□□ -0.28
LIMS1-202ENST00000338045 A0A0A6YYD4 124 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 A0A1W2PP11 408 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 MED19A0JLT2 244 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ANKRD20A5PA0PJZ0 165 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 MPIG6BO95866 241 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ECDO95905 644 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 BMP5P22003 454 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 SLC6A1P30531 599 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 PRSS3P35030 304 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 BTCP35070 178 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ATP1B3P54709 279 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 PRDX4Q13162 271 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ZNF260Q3ZCT1 412 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 FAM89BQ8N5H3 189 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
LIMS1-202ENST00000338045 ENKURQ8TC29 256 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 GPX8Q8TED1 209 aa13.29□□□□□ -0.28
LIMS1-202ENST00000338045 AQP3Q92482 292 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms