RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-202ENST00000334414 PCNPQ8WW12 178 aaKnown RBP4.99□□□□□ -1.61
PTPRB-202ENST00000334414 APCSP02743 223 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 CTSDP07339 412 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-202ENST00000334414 TGFBR1P36897 503 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 TCL1AP56279 114 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 PPIAP62937 165 aaKnown RBP4.99□□□□□ -1.61
PTPRB-202ENST00000334414 OR1C1Q15619 314 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 LIPNQ5VXI9 398 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM65Q6PI78 240 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 SLC39A5Q6ZMH5 540 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 FAM24BQ8N5W8 94 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM99Q8N816 258 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 MARCH1Q8TCQ1 289 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 PTX4Q96A99 478 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 ADTRPQ96IZ2 230 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 ALX4Q9H161 411 aaPredicted RBP4.99□□□□□ -1.61
PTPRB-202ENST00000334414 AP5S1Q9NUS5 200 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 DOK5Q9P104 306 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 PISDQ9UG56 409 aa4.99□□□□□ -1.61
PTPRB-202ENST00000334414 DSPPQ9NZW4 1301 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 C3orf85A0A1B0GTC6 90 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 ZBTB25P24278 435 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 C20orf27Q9GZN8 174 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 CTSFQ9UBX1 484 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TGIF2-C20orf24A0A0A6YYL0 155 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 DIRC3C9JPN6 131 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 H3BNC9 293 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TAPBPO15533 448 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SCO1O75880 301 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 HIST1H1DP16402 221 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 CST5P28325 142 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 Q6ZPB1 254 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OR5AS1Q8N127 324 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM251Q8N6I4 163 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OR5M9Q8NGP3 310 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 CLDN23Q96B33 292 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 STARD4Q96DR4 205 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TOE1Q96GM8 510 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 NUDT16L1Q9BRJ7 211 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PRR14Q9BWN1 585 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OBP2AQ9NY56 170 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM30CPA0ZSE6 113 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SIGLEC5O15389 551 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 DCTDP32321 178 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OR5R1Q8NH85 324 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF384Q8TF68 577 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 MARCH5Q9NX47 278 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 FTSJ1Q9UET6 329 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 GYPAP02724 150 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 ST3GAL2Q16842 350 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 LIPIQ6XZB0 460 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 THAP3Q8WTV1 239 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OXGR1Q96P68 337 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 A0A1B0GX78 115 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 A0A1W2PP55 124 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 FRG2CA6NGY1 282 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SLC17A3O00476 420 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 DCDP81605 110 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SPATA45Q537H7 98 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PARM1Q6UWI2 310 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TAS1R1Q7RTX1 841 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 MUC20Q8N307 709 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OTOSQ8NHW6 89 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PRSS50Q9UI38 385 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 AMMECR1Q9Y4X0 333 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TRAV9-1A0A075B6T8 112 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 CTBSQ01459 385 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 MORN4Q8NDC4 146 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 DEFB118Q96PH6 123 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 KLF16Q9BXK1 252 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OPN4Q9UHM6 478 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 RPL34P49207 117 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PFN3P60673 137 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SLC25A42Q86VD7 318 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 NPEPL1Q8NDH3 523 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 HSD17B8Q92506 261 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 APOBEC3DQ96AK3 386 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PLSCR3Q9NRY6 295 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 NHSQ6T4R5 1651 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 A6NL46 340 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF195O14628 629 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 TCF21O43680 179 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 DHRS3O75911 302 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 LIMK1P53667 647 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PARS2Q7L3T8 475 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 NUFIP2Q7Z417 695 aaKnown RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PDPNQ86YL7 162 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 KTI12Q96EK9 354 aaPredicted RBP4.98□□□□□ -1.61
PTPRB-202ENST00000334414 ELOVL1Q9BW60 279 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 PMS2P1A4D2B8 440 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 CDS2O95674 445 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 OR2C3Q8N628 320 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 MEGF10Q96KG7 1140 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 C16orf70Q9BSU1 422 aa4.98□□□□□ -1.61
PTPRB-202ENST00000334414 IGLV3-10A0A075B6K4 115 aa4.97□□□□□ -1.61
PTPRB-202ENST00000334414 SMPD2O60906 423 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms