RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 TBPP20226 339 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 HTR2BP41595 481 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 KIR2DL3P43628 341 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 IAH1Q2TAA2 248 aaPredicted RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 ALKBH6Q3KRA9 238 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 ZNF468Q5VIY5 522 aaPredicted RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 CPEB3Q8NE35 698 aaKnown RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 SLAMF9Q96A28 289 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 FBXO17Q96EF6 278 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 ADAT1Q9BUB4 502 aaKnown RBP12.06□□□□□ -0.48
DDX54-202ENST00000314045 C12orf4Q9NQ89 552 aa12.06□□□□□ -0.48
DDX54-202ENST00000314045 TICRRQ7Z2Z1 1910 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 TUSC2O75896 110 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 HIKESHIQ53FT3 197 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 STX12Q86Y82 276 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 SEH1LQ96EE3 360 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 TRMT61AQ96FX7 289 aaKnown RBP12.05□□□□□ -0.48
DDX54-202ENST00000314045 GMPPAQ96IJ6 420 aaPredicted RBP12.05□□□□□ -0.48
DDX54-202ENST00000314045 FAM117AQ9C073 453 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 SPRY3O43610 288 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 SCAND1P57086 179 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 PPP1CBP62140 327 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 PLGLAQ15195 96 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 KCNJ8Q15842 424 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 OR2W3Q7Z3T1 314 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 OR4S1Q8NGB4 309 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 OR13G1Q8NGZ3 307 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 LOC102723996A0A087X1L8 192 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 TMEM229AB2RXF0 380 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 TERTO14746 1132 aaKnown RBP12.05□□□□□ -0.48
DDX54-202ENST00000314045 CTAG2O75638 210 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 PGA4P0DJD7 388 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 PGA3P0DJD8 388 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 OR3A4PP47883 348 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 SRPXP78539 464 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 NUFIP2Q7Z417 695 aaKnown RBP12.05□□□□□ -0.48
DDX54-202ENST00000314045 GLCCI1Q86VQ1 547 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 CXorf67Q86X51 503 aaPredicted RBP12.05□□□□□ -0.48
DDX54-202ENST00000314045 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
DDX54-202ENST00000314045 RFPL3SP0C7P2 107 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 RPL23AP62750 156 aaKnown RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 LGI3Q8N145 548 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 FDCSPQ8NFU4 85 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 OR2Z1Q8NG97 314 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 ARHGAP5-AS1Q96IT6 56 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 FYTTD1Q96QD9 318 aaKnown RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 PTDSS2Q9BVG9 487 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 FAM90A27PA6NNH2 459 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 KLF7O75840 302 aaPredicted RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 RGS11O94810 467 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 GSK3AP49840 483 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 RPS4XP62701 263 aaKnown RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 PNLIPRP3Q17RR3 467 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 OR51H1Q8NH63 302 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 MARCH1Q8TCQ1 289 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 ZNF426Q9BUY5 554 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 GPR137BO60478 399 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 WDR1O75083 606 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 FCGR2CP31995 323 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 NUBP1P53384 320 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 TMEM211Q6ICI0 200 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 C20orf196Q8IYI0 205 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 STOML3Q8TAV4 291 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 EXTL1Q92935 676 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 SGK3Q96BR1 496 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
DDX54-202ENST00000314045 TMEM200CA6NKL6 621 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 OR6K3Q8NGY3 331 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 SIGLEC12Q96PQ1 595 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 MTFP1Q9UDX5 166 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 SLC23A1Q9UHI7 598 aa12.04□□□□□ -0.48
DDX54-202ENST00000314045 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 IFNA17P01571 189 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 RPA2P15927 270 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 SMIM21Q3B7S5 101 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 OR52W1Q6IF63 320 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 SLC25A47Q6Q0C1 308 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 HAS2Q92819 552 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 TINAGL1Q9GZM7 467 aaPredicted RBP12.03□□□□□ -0.48
DDX54-202ENST00000314045 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
DDX54-202ENST00000314045 EDARQ9UNE0 448 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 SMLR1H3BR10 107 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 CCSO14618 274 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 TRAPPC2P0DI81 140 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 TRAPPC2BP0DI82 140 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 KIR3DL2P43630 455 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 LINC00303Q3SY05 128 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 LINC01590Q5TEZ4 76 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 ELP2Q6IA86 826 aa12.03□□□□□ -0.48
DDX54-202ENST00000314045 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms