RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SEC11BP0C7V7 166 aa15.97■□□□□ 0.15
SPSB4-201ENST00000310546 RBMXP38159 391 aaKnown RBP15.97■□□□□ 0.15
SPSB4-201ENST00000310546 TNFRSF9Q07011 255 aa15.97■□□□□ 0.15
SPSB4-201ENST00000310546 FNDC9Q8TBE3 224 aa15.97■□□□□ 0.15
SPSB4-201ENST00000310546 NSA2O95478 260 aaKnown RBP15.96■□□□□ 0.15
SPSB4-201ENST00000310546 APBB3O95704 486 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 PCP4P48539 62 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 HAGHQ16775 308 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 OR13G1Q8NGZ3 307 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 M1APQ8TC57 530 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 CTHRC1Q96CG8 243 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 NDUFAF3Q9BU61 184 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 WFDC1Q9HC57 220 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 FAM86C1Q9NVL1 165 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 SLC5A6Q9Y289 635 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 MKRN2OSH3BPM6 223 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 SOCS1O15524 211 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 ZNF217O75362 1048 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 MBP02144 154 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 AMY2BP19961 511 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 APLNRP35414 380 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 AFF3P51826 1226 aaKnown RBP15.96■□□□□ 0.15
SPSB4-201ENST00000310546 NUBP1P53384 320 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 CCL20P78556 96 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 ERV3-1Q14264 604 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 C1QL3Q5VWW1 255 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 CBLN3Q6UW01 205 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 METTL21AQ8WXB1 218 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 SCGB3A2Q96PL1 93 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 OR2A5Q96R48 311 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 TPSD1Q9BZJ3 242 aa15.96■□□□□ 0.15
SPSB4-201ENST00000310546 MPIG6BO95866 241 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ZNF10P21506 573 aaPredicted RBP15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ARFRP1Q13795 201 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ZNF141Q15928 474 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 PCK2Q16822 640 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 EMC4Q5J8M3 183 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 AADACL3Q5VUY0 350 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 PLXDC2Q6UX71 529 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 C5orf24Q7Z6I8 188 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 BANF2Q9H503 90 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 OR14J1Q9UGF5 321 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ARHGEF17Q96PE2 2063 aaPredicted RBP15.95■□□□□ 0.14
SPSB4-201ENST00000310546 TMEM269A0A1B0GVZ9 245 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 TCRBV21S2A2A0A5A6 115 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 CYR61O00622 381 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 XRCC2O43543 280 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 RNH1P13489 461 aaKnown RBP15.95■□□□□ 0.14
SPSB4-201ENST00000310546 RPS2P15880 293 aaKnown RBP15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ASCL1P50553 236 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 PLAC9Q5JTB6 97 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ZNF776Q68DI1 518 aaPredicted RBP15.95■□□□□ 0.14
SPSB4-201ENST00000310546 TAAR8Q969N4 342 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 OR52A1Q9UKL2 312 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 RHBDD3Q9Y3P4 386 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 SYT7O43581 403 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 SMIM10L1P0DMW3 83 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 FGF7P21781 194 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 ROM1Q03395 351 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 VAX1Q5SQQ9 334 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 DNLZQ5SXM8 178 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 RNF144BQ7Z419 303 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 OR5R1Q8NH85 324 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 NT5CQ8TCD5 201 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 RAB24Q969Q5 203 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 C8orf44Q96CB5 159 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 SMIM10Q96HG1 83 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 MRGPRX1Q96LB2 322 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 SLC25A31Q9H0C2 315 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 EHFQ9NZC4 300 aa15.95■□□□□ 0.14
SPSB4-201ENST00000310546 C9J4A7 227 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 ADH1BP00325 375 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 GZMBP10144 247 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 CTLA4P16410 223 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 HOXA6P31267 233 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 BTG2P78543 158 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 WBP2NLQ6ICG8 309 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 NPSR1Q6W5P4 371 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 ATG4DQ86TL0 474 aaPredicted RBP15.94■□□□□ 0.14
SPSB4-201ENST00000310546 LYPD6Q86Y78 171 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 ZNF524Q96C55 264 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 DDA1Q9BW61 102 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 SIRT7Q9NRC8 400 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 STARD5Q9NSY2 213 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 C1orf123Q9NWV4 160 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 RFNGQ9Y644 331 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 DIRAS3O95661 229 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 PNMTP11086 282 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 PAX1P15863 534 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 APOBEC1P41238 236 aaKnown RBP15.94■□□□□ 0.14
SPSB4-201ENST00000310546 QRFPP83859 136 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 ZNF429Q86V71 674 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 LINC00346Q8IVM7 164 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 SLC22A24Q8N4F4 322 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 OR6X1Q8NH79 312 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 METTL9Q9H1A3 318 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 Q9N2J8 555 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 CENPMQ9NSP4 180 aa15.94■□□□□ 0.14
SPSB4-201ENST00000310546 RBFOX3A6NFN3 312 aa15.93■□□□□ 0.14
SPSB4-201ENST00000310546 GEMIN2O14893 280 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms