RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 DMRTC1Q5HYR2 192 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 BCDIN3DQ7Z5W3 292 aaKnown RBP16.1■□□□□ 0.17
LIME1-201ENST00000309546 THAP5Q7Z6K1 395 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 UTP4Q969X6 686 aaKnown RBP16.1■□□□□ 0.17
LIME1-201ENST00000309546 RAB3IPQ96QF0 476 aaPredicted RBP16.1■□□□□ 0.17
LIME1-201ENST00000309546 OR8B4Q96RC9 309 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 CHIAQ9BZP6 476 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 PBOV1Q9GZY1 135 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 SIRT7Q9NRC8 400 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 KPTNQ9Y664 436 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 TMEM14AQ9Y6G1 99 aa16.1■□□□□ 0.17
LIME1-201ENST00000309546 A0A0U1RQV5 110 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 A0A1B0GVI7 797 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 ZNF732B4DXR9 585 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 GLRA1P23415 457 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 RIDAP52758 137 aaKnown RBP16.09■□□□□ 0.17
LIME1-201ENST00000309546 ESRRGP62508 458 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 DEGS2Q6QHC5 323 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 ZNF679Q8IYX0 411 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 OR51E1Q8TCB6 317 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 ASB17Q8WXJ9 295 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 GAFA1Q96PS6 74 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 GPR84Q9NQS5 396 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 FAM53CQ9NYF3 392 aa16.09■□□□□ 0.17
LIME1-201ENST00000309546 H2AFY2Q9P0M6 372 aaPredicted RBP16.09■□□□□ 0.17
LIME1-201ENST00000309546 A0A0U1RQK1 487 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 ACOD1A6NK06 481 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 POM121CA8CG34 1229 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 ZNF254O75437 659 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 RHBDL1O75783 438 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 GABRA2P47869 451 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 TGM4P49221 684 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 GNG3P63215 75 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 PRB3Q04118 309 aaPredicted RBP16.08■□□□□ 0.16
LIME1-201ENST00000309546 MFGE8Q08431 387 aaPredicted RBP16.08■□□□□ 0.16
LIME1-201ENST00000309546 ATP6AP1Q15904 470 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 PLCXD3Q63HM9 321 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 MOB3CQ70IA8 216 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 CMTM4Q8IZR5 234 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 TMEM86BQ8N661 226 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 TCEANCQ8N8B7 351 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 LY6G5BQ8NDX9 201 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 SSMEM1Q8WWF3 244 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 DCTN5Q9BTE1 182 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 DNTTIP1Q9H147 329 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 NLKQ9UBE8 527 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 SLC25A10Q9UBX3 287 aaPredicted RBP16.08■□□□□ 0.16
LIME1-201ENST00000309546 PIGLQ9Y2B2 252 aa16.08■□□□□ 0.16
LIME1-201ENST00000309546 G3V2T6 193 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 GPR37O15354 613 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 FAHP16930 419 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 NDUFB7P17568 137 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 DCTDP32321 178 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 RAG2P55895 527 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 CXCR4P61073 352 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 ROM1Q03395 351 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 RIPPLY1Q0D2K3 151 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 BNIP1Q12981 228 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 DGUOKQ16854 277 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 FAM76BQ5HYJ3 339 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 ATPAF1Q5TC12 328 aaPredicted RBP16.07■□□□□ 0.16
LIME1-201ENST00000309546 ZNF788Q6ZQV5 615 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 MEPCEQ7L2J0 689 aaKnown RBP16.07■□□□□ 0.16
LIME1-201ENST00000309546 SLC35F2Q8IXU6 374 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 TBC1D15Q8TC07 691 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 PPP1R14AQ96A00 147 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 POMT1Q9Y6A1 747 aa16.07■□□□□ 0.16
LIME1-201ENST00000309546 A0A1W2PQ09 198 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 A0A1W2PRD5 423 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 A0A1W2PRF3 423 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 A0A1W2PRM7 423 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 OR2AT4A6NND4 320 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 LOC110117498-PIK3R3F6TDL0 507 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 MAGEB4O15481 346 aaPredicted RBP16.06■□□□□ 0.16
LIME1-201ENST00000309546 IGHV4-59P01825 116 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 ATP6V1B1P15313 513 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 EPHA2P29317 976 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 DLX1P56177 255 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 CEACAM21Q3KPI0 293 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 PRR31Q5SQ13 230 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 SLX4IPQ5VYV7 408 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 HAGHLQ6PII5 290 aaPredicted RBP16.06■□□□□ 0.16
LIME1-201ENST00000309546 ZNF322Q6U7Q0 402 aaPredicted RBP16.06■□□□□ 0.16
LIME1-201ENST00000309546 PLEKHG7Q6ZR37 379 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 OR4F5Q8NH21 305 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 ANGPTL6Q8NI99 470 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 MED30Q96HR3 178 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 IL4I1Q96RQ9 567 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 APOL4Q9BPW4 351 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 SEMA6AQ9H2E6 1030 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 OR51I2Q9H344 312 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 ELL3Q9HB65 397 aaPredicted RBP16.06■□□□□ 0.16
LIME1-201ENST00000309546 ADGRL4Q9HBW9 690 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 NUFIP1Q9UHK0 495 aaKnown RBP16.06■□□□□ 0.16
LIME1-201ENST00000309546 ENPP5Q9UJA9 477 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 FAM96BQ9Y3D0 163 aa16.06■□□□□ 0.16
LIME1-201ENST00000309546 SLC22A31A6NKX4 558 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 OR5B21A6NL26 309 aa16.05■□□□□ 0.16
LIME1-201ENST00000309546 ZNF670-ZNF695F2Z2N8 137 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms