RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SSX5O60225 188 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 HPXP02790 462 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 APLNRP35414 380 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 RAD52P43351 418 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 GZMKP49863 264 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 FUT6P51993 359 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 TECTBQ96PL2 329 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 TRAF4Q9BUZ4 470 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-201ENST00000309469 TM2D1Q9BX74 207 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 TINAGL1Q9GZM7 467 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-201ENST00000309469 NPDC1Q9NQX5 325 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF222Q9UK12 451 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 SLC7A11Q9UPY5 501 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 KCNK7Q9Y2U2 307 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 STARD10Q9Y365 291 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 OR14I1A6ND48 311 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 PYCARD-AS1I3L0S3 204 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 SSNA1O43805 119 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 SERPINA5P05154 406 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 IGHV1-2P23083 117 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 TGFBR3Q03167 851 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 CDK10Q15131 360 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 ACSF3Q4G176 576 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-201ENST00000309469 METTL11BQ5VVY1 283 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 MDP1Q86V88 176 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 OR4S1Q8NGB4 309 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 MS4A3Q96HJ5 214 aa18.39■□□□□ 0.53
ATG4D-201ENST00000309469 ZFHX4Q86UP3 3567 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 FAM172BPA6NC97 362 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 FOXI3A8MTJ6 420 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 K7EM74 188 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 NGFP01138 241 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 ANXA7P20073 488 aaKnown RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 KIR2DL2P43627 348 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 GNG2P59768 71 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 PNLIPRP3Q17RR3 467 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 PLCXD3Q63HM9 321 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 GLDNQ6ZMI3 551 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 MRPL21Q7Z2W9 205 aaKnown RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 GVQW1Q8N7I0 195 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 RBMXL3Q8N7X1 1067 aaKnown RBP18.38■□□□□ 0.53
ATG4D-201ENST00000309469 CNEP1R1Q8N9A8 125 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 MED30Q96HR3 178 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 ARHGAP5-AS1Q96IT6 56 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF75AQ96N20 296 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 METTL9Q9H1A3 318 aa18.38■□□□□ 0.53
ATG4D-201ENST00000309469 SMLR1H3BR10 107 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 MFNGO00587 321 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 IL5P05113 134 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF735P0CB33 412 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 EIF2S3P41091 472 aaKnown RBP18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ATP1B3P54709 279 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 NHLH1Q02575 133 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 SF3B4Q15427 424 aaKnown RBP eCLIP18.37■□□□□ 0.531e-7■■■■□ 20.4
ATG4D-201ENST00000309469 OR2A2Q6IF42 318 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 Q6ZT83 130 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 OR56B2PQ8NGI1 322 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 IFT46Q9NQC8 304 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 PTTG3PQ9NZH4 202 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 SSUH2Q9Y2M2 353 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 FAM186AA6NE01 2351 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 SPRY1O43609 319 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ANGPTL7O43827 346 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 CNOT4O95628 575 aaKnown RBP18.37■□□□□ 0.53
ATG4D-201ENST00000309469 AMY2AP04746 511 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ANXA3P12429 323 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 CPT2P23786 658 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 HLXQ14774 488 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-201ENST00000309469 MEF2DQ14814 521 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF585AQ6P3V2 769 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ASCL4Q6XD76 172 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 PIAS4Q8N2W9 510 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-201ENST00000309469 SCNM1Q9BWG6 230 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 BOLA1Q9Y3E2 137 aa18.37■□□□□ 0.53
ATG4D-201ENST00000309469 ARHGAP21Q5T5U3 1957 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 TNRC6AQ8NDV7 1962 aaKnown RBP18.36■□□□□ 0.53
ATG4D-201ENST00000309469 LOC400499M0QZD8 3231 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 AKAP13Q12802 2813 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 ZNF850A8MQ14 1090 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 RGS13O14921 159 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 RAD51DO75771 328 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 SULT1A3P0DMM9 295 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 SULT1A4P0DMN0 295 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 CXCL3P19876 107 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 BLVRBP30043 206 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-201ENST00000309469 RSU1Q15404 277 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 CCDC36Q8IYA8 594 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 BPIFB2Q8N4F0 458 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 SLC30A7Q8NEW0 376 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 OR6K3Q8NGY3 331 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 SEC22CQ9BRL7 303 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATG4D-201ENST00000309469 PLSCR3Q9NRY6 295 aa18.36■□□□□ 0.53
ATG4D-201ENST00000309469 PLATP00750 562 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 WNT5AP41221 380 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 NSUN5P2Q63ZY6 315 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 OR52W1Q6IF63 320 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 RPUSD3Q6P087 351 aaKnown RBP18.35■□□□□ 0.53
ATG4D-201ENST00000309469 IDO2Q6ZQW0 420 aa18.35■□□□□ 0.53
ATG4D-201ENST00000309469 OPA3Q9H6K4 179 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms