RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CLDN34H7C241 214 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 RHBDL1O75783 438 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 TFF1P04155 84 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 ATP6V1B1P15313 513 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 MAP2K3P46734 347 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 ACTG1P63261 375 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 MICBQ29980 383 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 CD276Q5ZPR3 534 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 TMEM42Q69YG0 159 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 ELMOD2Q8IZ81 293 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 ANGPTL6Q8NI99 470 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 RNF166Q96A37 237 aaPredicted RBP16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 RNF170Q96K19 258 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 WDFY2Q96P53 400 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 MNTQ99583 582 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 MS4A7Q9GZW8 240 aaPredicted RBP16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 ENOPH1Q9UHY7 261 aa16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 RPUSD1Q9UJJ7 312 aaKnown RBP16.37■□□□□ 0.21
PDZRN3-202ENST00000308537 CENPVL3A0A0U1RRI6 287 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 SAC3D1A6NKF1 404 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 AKR7A2O43488 359 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 ALPLP05186 524 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 LIPFP07098 398 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 RNASE1P07998 156 aaKnown RBP16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 FAHP16930 419 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 EGR3Q06889 387 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 SLC9A3R2Q15599 337 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF829Q3KNS6 432 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 CEACAM21Q3KPI0 293 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 CEP78Q5JTW2 689 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 ZBTB37Q5TC79 503 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 RUSC1-AS1Q66K80 236 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 C12orf54Q6X4T0 127 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF788Q6ZQV5 615 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 GID4Q8IVV7 300 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 OR51G2Q8NGK0 314 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 EME1Q96AY2 570 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 FAM71F1Q96KD3 344 aaPredicted RBP16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF222Q9UK12 451 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 IKZF2Q9UKS7 526 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 R4GMQ9 66 aa16.36■□□□□ 0.21
PDZRN3-202ENST00000308537 DHRS3O75911 302 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 HKR1P10072 659 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 HTR1FP30939 366 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 GPM6AP51674 278 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 DEFB112Q30KQ8 113 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 AWAT1Q58HT5 328 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 ZFP1Q6P2D0 407 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 OR5T2Q8NGG2 359 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 OR14K1Q8NGZ2 314 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 GCDHQ92947 438 aaPredicted RBP16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 UBE2FQ969M7 185 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 GAFA1Q96PS6 74 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 PCGF1Q9BSM1 259 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 SNTG1Q9NSN8 517 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 WARS2Q9UGM6 360 aaKnown RBP16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 V9GYS6 101 aa16.35■□□□□ 0.21
PDZRN3-202ENST00000308537 ZNF732B4DXR9 585 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 LOC110117498-PIK3R3F6TDL0 507 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 P2RY10O00398 339 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 APOL3O95236 402 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 ECDO95905 644 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 CCL1P22362 96 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 ISL1P61371 349 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 GNG3P63215 75 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 RIPPLY1Q0D2K3 151 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 BAMBIQ13145 260 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 KPNB1Q14974 876 aaKnown RBP16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 DGUOKQ16854 277 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 PNLDC1Q8NA58 520 aaKnown RBP16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 OR8J1Q8NGP2 316 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 C8orf46Q8TAG6 207 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 ST8SIA4Q92187 359 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 AQP3Q92482 292 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 DNTTIP1Q9H147 329 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 RIBC2Q9H4K1 309 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 MOB1AQ9H8S9 216 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 USE1Q9NZ43 259 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 H2AFY2Q9P0M6 372 aaPredicted RBP16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 OR52A1Q9UKL2 312 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 SLC22A13Q9Y226 551 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 PIGLQ9Y2B2 252 aa16.34■□□□□ 0.21
PDZRN3-202ENST00000308537 IGKV1D-17A0A075B6S4 117 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 A0A1W2PQL4 384 aaPredicted RBP16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 ZNF670-ZNF695F2Z2N8 137 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 TOX4O94842 621 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 GMFBP60983 142 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 ARF6P62330 175 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 RBMS3Q6XE24 437 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 SLC36A1Q7Z2H8 476 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 OR5A2Q8NGI9 324 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 FAM81AQ8TBF8 368 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 RBM4BQ9BQ04 359 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 DCTN5Q9BTE1 182 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 ZMAT3Q9HA38 289 aaKnown RBP16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 MAB21L2Q9Y586 359 aa16.33■□□□□ 0.2
PDZRN3-202ENST00000308537 PKD1L1Q8TDX9 2849 aa16.32■□□□□ 0.2
PDZRN3-202ENST00000308537 OR5B21A6NL26 309 aa16.32■□□□□ 0.2
PDZRN3-202ENST00000308537 J3QRE1 110 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms