RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 RBM38Q9H0Z9 239 aaKnown RBP12.48□□□□□ -0.41
PRKCB-201ENST00000303531 CLCF1Q9UBD9 225 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 OR5V1Q9UGF6 321 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 CYTIPO60759 359 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 AKR1C3P42330 323 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 H3F3AP84243 136 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 RAB35Q15286 201 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 OR2W3Q7Z3T1 314 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 UQCC2Q9BRT2 126 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 ZPBPQ9BS86 351 aa12.48□□□□□ -0.41
PRKCB-201ENST00000303531 FUT7Q11130 342 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CLLU1Q5K131 121 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 MTFP1Q9UDX5 166 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 ALG1L2C9J202 215 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 F2RP25116 425 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CDKN2AP42771 156 aaKnown RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 A0A1W2PPQ1 181 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CTAG2O75638 210 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 SFTA3P0C7M3 94 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 H3BMH7 237 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 HYAL1Q12794 435 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 RGS7BPQ6MZT1 257 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 MUC20Q8N307 709 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 DEFB123Q8N688 67 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 SIRT3Q9NTG7 399 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 TGOLN2O43493 480 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 ACSM4P0C7M7 580 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CD96P40200 585 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 ABI3BPQ7Z7G0 1075 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 KISS1RQ969F8 398 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-201ENST00000303531 CLDN23Q96B33 292 aa12.47□□□□□ -0.41
PRKCB-201ENST00000303531 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 ONECUT2O95948 504 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 ZNF561Q8N587 486 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 PRRX2Q99811 253 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 SULT1A3P0DMM9 295 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 SULT1A4P0DMN0 295 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 MVDP53602 400 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 OR1C1Q15619 314 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 PCM1Q15154 2024 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 RNASEK-C17orf49H0YIS7 233 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 ZBTB25P24278 435 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 LIMK1P53667 647 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 FABP9Q0Z7S8 132 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 DHRS2Q13268 280 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 GSG1Q2KHT4 349 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 LRRTM1Q86UE6 522 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 SIGLECL1Q8N7X8 197 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 PPP1R1AQ13522 171 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 RPL7L1Q6DKI1 246 aaKnown RBP12.46□□□□□ -0.41
PRKCB-201ENST00000303531 GUSBP11Q6P575 273 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 VN1R4Q7Z5H5 301 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
PRKCB-201ENST00000303531 DOCK1Q14185 1865 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 SEC14L6B5MCN3 397 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 ASCL1P50553 236 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 CXorf67Q86X51 503 aaPredicted RBP12.46□□□□□ -0.42
PRKCB-201ENST00000303531 OR11G2Q8NGC1 345 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 SCN1AP35498 2009 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 CT62P0C5K7 136 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 RD3LP0DJH9 198 aa12.46□□□□□ -0.42
PRKCB-201ENST00000303531 PTPRZ1P23471 2315 aaPredicted RBP12.46□□□□□ -0.42
PRKCB-201ENST00000303531 DHRS3O75911 302 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 PRDX4Q13162 271 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 TAAR9Q96RI9 348 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 DHRS9Q9BPW9 319 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 SARGQ9BW04 601 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 ZP3P21754 424 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 CTGFP29279 349 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 PTGFRP43088 359 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 UBALD1Q8TB05 177 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 MAP6Q96JE9 813 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 FAM173AQ9BQD7 235 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 PLA2G3Q9NZ20 509 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 SLC31A2O15432 143 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 MIDNQ504T8 468 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 PRR27Q6MZM9 219 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 TMPRSS13Q9BYE2 586 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 ZNF320A2RRD8 509 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 ANKRD37Q7Z713 158 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 CLRN3Q8NCR9 226 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
PRKCB-201ENST00000303531 MCHR2Q969V1 340 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms