RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 NPPBP16860 134 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SLC6A12P48065 614 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF121P58317 390 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CST9Q5W186 159 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 Q6ZSR9 355 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 MORN4Q8NDC4 146 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 OR52L2PQ8NGH6 319 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 EXTL1Q92935 676 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 HSPB2A8KAH6 182 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 OR1C1Q15619 314 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 HSPB2Q16082 182 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 STAC2Q6ZMT1 411 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 ANKRD53Q8N9V6 530 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 TAAR9Q96RI9 348 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 RNF167Q9H6Y7 350 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 LOXL2Q9Y4K0 774 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 RHBDL1O75783 438 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 MGPP08493 103 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SLC6A1P30531 599 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 RPS27P42677 84 aaKnown RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 ZXDAP98168 799 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 ELOBQ15370 118 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM52BQ4KMG9 183 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 Q6ZNX1 250 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 CADM3Q8N126 398 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 IL36GQ9NZH8 169 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 THAP10Q9P2Z0 257 aaPredicted RBP9.36□□□□□ -0.91
CLIP1-201ENST00000302528 AUP1Q9Y679 476 aa9.36□□□□□ -0.91
CLIP1-201ENST00000302528 PLCH1Q4KWH8 1693 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 J3KRW8 73 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SOCS7O14512 581 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 GPX2P18283 190 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 COX7A1P24310 79 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 VEGFBP49765 207 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 PFN3P60673 137 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 OR11G2Q8NGC1 345 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 APOBEC3DQ96AK3 386 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-201ENST00000302528 PHYHIPLQ96FC7 376 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 WSB1Q9Y6I7 421 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 TARM1B6A8C7 271 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 DHHO43323 396 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SEMA7AO75326 666 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 ATF1P18846 271 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 FZD2Q14332 565 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 HIST3H3Q16695 136 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 PNLIPRP3Q17RR3 467 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 OTUD1Q5VV17 481 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SYS1Q8N2H4 156 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 VN1R2Q8NFZ6 395 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF426Q9BUY5 554 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 KCNK15Q9H427 330 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 IFT22Q9H7X7 185 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 FKBP11Q9NYL4 201 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 CACNA1SQ13698 1873 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 DEFB108AA8MXU0 73 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SIAH2O43255 324 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 ORM2P19652 201 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 HFEQ30201 348 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 MS4A6EQ96DS6 147 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 ESRP2Q9H6T0 727 aaKnown RBP9.35□□□□□ -0.91
CLIP1-201ENST00000302528 AMMECR1Q9Y4X0 333 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-201ENST00000302528 K7EQS6 105 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
CLIP1-201ENST00000302528 G6PCP35575 357 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 CEACAM6P40199 344 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 PPICP45877 212 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 AANATQ16613 207 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SMUG1Q53HV7 270 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 SAXO2Q658L1 398 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 OR52B4Q8NGK2 314 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 OR5R1Q8NH85 324 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 ASB13Q8WXK3 278 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 MAP1LC3CQ9BXW4 147 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM140Q9NV12 185 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 MMP24Q9Y5R2 645 aa9.35□□□□□ -0.91
CLIP1-201ENST00000302528 A6NDN8 102 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 FAHP16930 419 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR3A4PP47883 348 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TIAL1Q01085 375 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 IGFBP7Q16270 282 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR2A2Q6IF42 318 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM251Q8N6I4 163 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 OR2I1PQ8NGU4 316 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 UBALD1Q8TB05 177 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 SMIM19Q96E16 107 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 ATG101Q9BSB4 218 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 AUNIPQ9H7T9 357 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 MAP1LC3B2A6NCE7 125 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 NUDT3O95989 172 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CRYABP02511 175 aaKnown RBP9.34□□□□□ -0.91
CLIP1-201ENST00000302528 DCTDP32321 178 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 PRRX1P54821 245 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 CCSMST1Q4G0I0 132 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM128Q5BJH2 165 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 DMRTC1Q5HYR2 192 aa9.34□□□□□ -0.91
CLIP1-201ENST00000302528 Q8IYB0 196 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms