RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TMPRSS11FQ6ZWK6 438 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ZPBPQ9BS86 351 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 SLC35D1Q9NTN3 355 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 A0A1W2PPQ1 181 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 HSPB2A8KAH6 182 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 MT-CO3P00414 261 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 FUT3P21217 361 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 MPGP29372 298 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 DRD3P35462 400 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 MEOX1P50221 254 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 KISS1Q15726 138 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 HSPB2Q16082 182 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 EDARADDQ8WWZ3 215 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ADGRG7Q96K78 797 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 FAAP24Q9BTP7 215 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ZNF71Q9NQZ8 489 aaPredicted RBP10.26□□□□□ -0.77
USP53-201ENST00000274030 PLCH1Q4KWH8 1693 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 MED19A0JLT2 244 aaPredicted RBP10.26□□□□□ -0.77
USP53-201ENST00000274030 TRIM77I1YAP6 450 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 EPPINO95925 133 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 THBS4P35443 961 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 ANKRD37Q7Z713 158 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 GALNT16Q8N428 558 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 KIAA1958Q8N8K9 716 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 CORO2AQ92828 525 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 CABLES2Q9BTV7 478 aa10.26□□□□□ -0.77
USP53-201ENST00000274030 SNRPGP15A8MWD9 76 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ZNF32P17041 273 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 CDKN2AP42771 156 aaKnown RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 FABP9Q0Z7S8 132 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 OR5I1Q13606 314 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ZNRF4Q8WWF5 429 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ZNF707Q96C28 371 aaPredicted RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 CLEC1BQ9P126 229 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 KCNE1BA0A087WTH5 132 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 OR5H15A6NDH6 313 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 FAM90A27PA6NNH2 459 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 COX7A2P2O60397 106 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ENDOGQ14249 297 aaKnown RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 SLC16A12Q6ZSM3 486 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ARHGEF39Q8N4T4 335 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 PP6455Q8WZ26 134 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 N4BP2Q86UW6 1770 aaPredicted RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 ANKRD36CQ5JPF3 1778 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MAST2Q6P0Q8 1798 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 RFPL4AA6NLU0 287 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 RFPL4AL1F8VTS6 287 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 CDK5Q00535 292 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 C6orf201Q7Z4U5 140 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 C17orf78Q8N4C9 275 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ZBTB44Q8NCP5 570 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MCHR2Q969V1 340 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MOB3AQ96BX8 217 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 FAM122AQ96E09 287 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 TSPAN32Q96QS1 320 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 PLAC1Q9HBJ0 212 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 SERPINE3A8MV23 424 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 NTN1O95631 604 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 GZMKP49863 264 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MMP15P51511 669 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 TMEM128Q5BJH2 165 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 PWWP2BQ6NUJ5 590 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 SSX7Q7RTT5 188 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 VN1R4Q7Z5H5 301 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 DTWD2Q8NBA8 298 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MOGAT1Q96PD6 335 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 OR51I2Q9H344 312 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 IGHV3-43A0A0B4J1X8 118 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 TRAV17A0A0B4J275 112 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 MASP2O00187 686 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 WNT1P04628 370 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 IGHV3-43DP0DP04 118 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 CEACAM6P40199 344 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 PCBP4P57723 403 aaKnown RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 SPINK9Q5DT21 86 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 PABPC1L2AQ5JQF8 200 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 CCL17Q92583 94 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 TAAR6Q96RI8 345 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 IER2Q9BTL4 223 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 LRFN3Q9BTN0 628 aa10.25□□□□□ -0.77
USP53-201ENST00000274030 ERRFI1Q9UJM3 462 aaPredicted RBP10.25□□□□□ -0.77
USP53-201ENST00000274030 IGHV1OR15-9A0A0B4J2B8 117 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 GALNSP34059 522 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 MPPED2Q15777 294 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 ETFDHQ16134 617 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 B3GNTL1Q67FW5 361 aaPredicted RBP10.24□□□□□ -0.77
USP53-201ENST00000274030 MRGPREQ86SM8 312 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 OR10D3Q8NH80 312 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 CLDN23Q96B33 292 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 ZNF385DQ9H6B1 395 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 DBX1A6NMT0 343 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 CYTIPO60759 359 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 NGFP01138 241 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 GNG3P63215 75 aa10.24□□□□□ -0.77
USP53-201ENST00000274030 TMEM267Q0VDI3 215 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms