RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 CDC14BO60729 498 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 FGF5P12034 268 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 HTR6P50406 440 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 HBG1P69891 147 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 HBG2P69892 147 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 INSM1Q01101 510 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 PLA1AQ53H76 456 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 MRPL2Q5T653 305 aaKnown RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 PRAMEF9Q5VWM5 478 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 CBLL1Q75N03 491 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TCTEX1D1Q8N7M0 179 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR5M1Q8NGP8 315 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TINAGL1Q9GZM7 467 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 GSTO2Q9H4Y5 243 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 LAMP1P11279 417 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 SHC1P29353 583 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CDK5Q00535 292 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 GLYR1Q49A26 553 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 PDLIM3Q53GG5 364 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 NHLRC1Q6VVB1 395 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 OR2M7Q8NG81 312 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 NUBPLQ8TB37 319 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 PERPQ96FX8 193 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ABHD17AQ96GS6 310 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 GINS3Q9BRX5 216 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 POFUT1Q9H488 388 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 RHOFQ9HBH0 211 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CLN8Q9UBY8 286 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 DIMT1Q9UNQ2 313 aaKnown RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 C19orf53Q9UNZ5 99 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 CD37P11049 281 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 VDAC1P21796 283 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CCKARP32238 428 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 HAAOP46952 286 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 LGALS7P47929 136 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CCSMST1Q4G0I0 132 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 SLCO4C1Q6ZQN7 724 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 MEPCEQ7L2J0 689 aaKnown RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 BMPERQ8N8U9 685 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 OR6K3Q8NGY3 331 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 REEP6Q96HR9 211 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ARV1Q9H2C2 271 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 NRIP3Q9NQ35 241 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CSAG2Q9Y5P2 127 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 A0A087WV62 115 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 A0A096LPE4 126 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 TRBV5-4A0A0C4DH59 114 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 A0A1W2PPZ6 126 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 OR7C1O76099 320 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 EML2O95834 649 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ACHEP22303 614 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 TACR1P25103 407 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CD81P60033 236 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 MESP2Q0VG99 397 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 HAGHQ16775 308 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 RPL22L1Q6P5R6 122 aaKnown RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 TMEM182Q6ZP80 229 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 C19orf35Q6ZS72 473 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 DOLPP1Q86YN1 238 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 OLIG1Q8TAK6 271 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 FAM168AQ92567 244 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 WNT2BQ93097 391 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 LPAR2Q9HBW0 351 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CISD1Q9NZ45 108 aaKnown RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 CGGBP1Q9UFW8 167 aaPredicted RBP7.01□□□□□ -1.29
USP3-201ENST00000268049 A4GNTQ9UNA3 340 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 LAMP3Q9UQV4 416 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 SCN5AQ14524 2016 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 IGHV5-51A0A0C4DH38 117 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ZNF727A8MUV8 499 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 M0R3H8 397 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 CCSO14618 274 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ADAM20O43506 726 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 TBX19O60806 448 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 ZNF90Q03938 601 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 SQSTM1Q13501 440 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 PRR27Q6MZM9 219 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 TVP23CQ96ET8 276 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 LINC00052Q96N35 136 aa7.01□□□□□ -1.29
USP3-201ENST00000268049 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
USP3-201ENST00000268049 LOC100289279A0A1B0GTE1 492 aa7□□□□□ -1.29
USP3-201ENST00000268049 NPBWR1P48145 328 aa7□□□□□ -1.29
USP3-201ENST00000268049 CD300CQ08708 224 aa7□□□□□ -1.29
USP3-201ENST00000268049 OR5I1Q13606 314 aa7□□□□□ -1.29
USP3-201ENST00000268049 SYT14P1Q58G82 188 aa7□□□□□ -1.29
USP3-201ENST00000268049 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
USP3-201ENST00000268049 SFRP5Q5T4F7 317 aa7□□□□□ -1.29
USP3-201ENST00000268049 FAM162BQ5T6X4 162 aa7□□□□□ -1.29
USP3-201ENST00000268049 SPINK14Q6IE38 97 aa7□□□□□ -1.29
USP3-201ENST00000268049 RPUSD3Q6P087 351 aaKnown RBP7□□□□□ -1.29
USP3-201ENST00000268049 ZDHHC23Q8IYP9 409 aa7□□□□□ -1.29
USP3-201ENST00000268049 SLC25A40Q8TBP6 338 aa7□□□□□ -1.29
USP3-201ENST00000268049 NEU4Q8WWR8 484 aaPredicted RBP7□□□□□ -1.29
USP3-201ENST00000268049 EDARADDQ8WWZ3 215 aa7□□□□□ -1.29
USP3-201ENST00000268049 MS4A6EQ96DS6 147 aa7□□□□□ -1.29
USP3-201ENST00000268049 OR2A14Q96R47 310 aa7□□□□□ -1.29
USP3-201ENST00000268049 NDFIP1Q9BT67 221 aa7□□□□□ -1.29
USP3-201ENST00000268049 MED9Q9NWA0 146 aa7□□□□□ -1.29
USP3-201ENST00000268049 AK3Q9UIJ7 227 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms