RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PNLIPRP3Q17RR3 467 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 SLC35G3Q8N808 338 aa13.47□□□□□ -0.25
CASC3-201ENST00000264645 SOX15O60248 233 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 PRF1P14222 555 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 RAC2P15153 192 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 FAHP16930 419 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 SRSF3P84103 164 aaKnown RBP13.46□□□□□ -0.25
CASC3-201ENST00000264645 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 MESTQ5EB52 335 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 PSMF1Q92530 271 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 MRPL24Q96A35 216 aaKnown RBP13.46□□□□□ -0.25
CASC3-201ENST00000264645 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 MS4A10Q96PG2 267 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 ZNF729A6NN14 1252 aaPredicted RBP13.46□□□□□ -0.25
CASC3-201ENST00000264645 C4orf47A7E2U8 309 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 HSBP1L1C9JCN9 74 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 IL33O95760 270 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 EPPINO95925 133 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 IAPPP10997 89 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 BCKDHBP21953 392 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 HTR5AP47898 357 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 HSD17B7P56937 341 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 COTL1Q14019 142 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 ZIC1Q15915 447 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 C6orf201Q7Z4U5 140 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 C11orf40Q8WZ69 217 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 OR51B6Q9H340 312 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 CARHSP1Q9Y2V2 147 aaKnown RBP13.46□□□□□ -0.25
CASC3-201ENST00000264645 OTOFQ9HC10 1997 aa13.46□□□□□ -0.25
CASC3-201ENST00000264645 SERPINE3A8MV23 424 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 OR3A4PP47883 348 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 ERVS71-1P61550 626 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 PMP22Q01453 160 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 DHODHQ02127 395 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 DRAM2Q6UX65 266 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 MRPL21Q7Z2W9 205 aaKnown RBP13.46□□□□□ -0.26
CASC3-201ENST00000264645 IL22RA2Q969J5 263 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 PLEKHF2Q9H8W4 249 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.26
CASC3-201ENST00000264645 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 A0A1W2PNV4 684 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 G3V3Q6 166 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 EIF4E2O60573 245 aaKnown RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 NTF3P20783 257 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 HNF1AP20823 631 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 RPS4XP62701 263 aaKnown RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 GAMTQ14353 236 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 C20orf196Q8IYI0 205 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 BAHD1Q8TBE0 780 aaPredicted RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 BSCL2Q96G97 398 aaPredicted RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 TRAV14DV4A0A0A6YYC5 116 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 OR2J2O76002 312 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 CDX1P47902 265 aaPredicted RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 CARD18P57730 90 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 KRTDAPP60985 99 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 C17orf67Q0P5P2 114 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 TIPARPQ7Z3E1 657 aaKnown RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 C19orf25Q9UFG5 118 aaPredicted RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 A0A1W2PPV9 198 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 BLACEA4D250 179 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 RABIFP47224 123 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 PDCD1Q15116 288 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 UNQ9370/PRO34162Q6UXP9 181 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 RNF222A6NCQ9 220 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 OLFM2O95897 454 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 FBP1P09467 338 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 RAB4AP20338 218 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 CDAP32320 146 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 SRSF5Q13243 272 aaKnown RBP13.45□□□□□ -0.26
CASC3-201ENST00000264645 VAMP3Q15836 100 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 PRAMEF20Q5VT98 475 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 BRICD5Q6PL45 260 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 GJC3Q8NFK1 279 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 ZDHHC11Q9H8X9 412 aa13.45□□□□□ -0.26
CASC3-201ENST00000264645 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 A0A1W2PNR3 127 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 TRAPPC2LH3BP13 241 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 TERTO14746 1132 aaKnown RBP13.44□□□□□ -0.26
CASC3-201ENST00000264645 VSIG8P0DPA2 414 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 CD1CP29017 333 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 KIR3DL2P43630 455 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 PCP4P48539 62 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 CSNK1EP49674 416 aaKnown RBP13.44□□□□□ -0.26
CASC3-201ENST00000264645 GAS1P54826 345 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 FGF8P55075 233 aaPredicted RBP13.44□□□□□ -0.26
CASC3-201ENST00000264645 PSG6Q00889 435 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 PHF19Q5T6S3 580 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 ZNF574Q6ZN55 896 aaPredicted RBP13.44□□□□□ -0.26
CASC3-201ENST00000264645 MR1Q95460 341 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 OR2A5Q96R48 311 aa13.44□□□□□ -0.26
CASC3-201ENST00000264645 THAP10Q9P2Z0 257 aaPredicted RBP13.44□□□□□ -0.26
CASC3-201ENST00000264645 IGHV3-20A0A0C4DH32 117 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms