RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PPA2Q9H2U2 334 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 METTL8Q9H825 291 aaKnown RBP10.08□□□□□ -0.8
TRAF4-202ENST00000262396 VNN3Q9NY84 501 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 TAS2R1Q9NYW7 299 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 IKZF2Q9UKS7 526 aa10.08□□□□□ -0.8
TRAF4-202ENST00000262396 SF3B6Q9Y3B4 125 aaKnown RBP10.08□□□□□ -0.8
TRAF4-202ENST00000262396 hCG_1809904A0A1W2PP81 198 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 A0A1W2PPE2 198 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 A0A1W2PR64 198 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 A0A1W2PRV1 198 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 TCRBV5S2A0A599 114 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 OR2AT4A6NND4 320 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF732B4DXR9 585 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 PRODHO43272 600 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 ANGPTL7O43827 346 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 CST4P01036 141 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 LGALS4P56470 323 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 PSMA6P60900 246 aaKnown RBP10.07□□□□□ -0.8
TRAF4-202ENST00000262396 ESRRGP62508 458 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 GNG3P63215 75 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 KLRD1Q13241 179 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 CEP78Q5JTW2 689 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 SLC35D3Q5M8T2 416 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 LCN1P1Q5VSP4 162 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 STUMQ69YW2 141 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 CD300LDQ6UXZ3 194 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 Q6ZTK2 550 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 CPOQ8IVL8 374 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 CCDC197Q8NCU1 140 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 LY6G5BQ8NDX9 201 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 OR5D13Q8NGL4 314 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 ASB9Q96DX5 294 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 DUS3LQ96G46 650 aaKnown RBP10.07□□□□□ -0.8
TRAF4-202ENST00000262396 RAB3IPQ96QF0 476 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-202ENST00000262396 AMELYQ99218 206 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 THTPAQ9BU02 230 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 WDR13Q9H1Z4 485 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 PPP1R3EQ9H7J1 279 aa10.07□□□□□ -0.8
TRAF4-202ENST00000262396 H2AFY2Q9P0M6 372 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-202ENST00000262396 TMEM269A0A1B0GVZ9 245 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SLC22A31A6NKX4 558 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 M0R1W7 72 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 PSMD9O00233 223 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SLC1A7O00341 560 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SIGLEC5O15389 551 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 MTRF1O75570 445 aaKnown RBP10.06□□□□□ -0.8
TRAF4-202ENST00000262396 CSF1P09603 554 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 OSMP13725 252 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SELLP14151 372 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 HOXB6P17509 224 aaKnown RBP10.06□□□□□ -0.8
TRAF4-202ENST00000262396 GABRA5P31644 462 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SAA4P35542 130 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 TGM4P49221 684 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 UBE2E1P51965 193 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ACTR3P61158 418 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ACSM1Q08AH1 577 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 RIPPLY1Q0D2K3 151 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 APOFQ13790 326 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 SNAPC1Q16533 368 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF829Q3KNS6 432 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ATPAF1Q5TC12 328 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-202ENST00000262396 METAP1DQ6UB28 335 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-202ENST00000262396 Q6ZSV7 163 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 OR8B12Q8NGG6 310 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 CLPTM1LQ96KA5 538 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 GAFA1Q96PS6 74 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 PRRG3Q9BZD7 231 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 TLNRD1Q9H1K6 362 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 C1orf21Q9H246 121 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ZNRD1Q9P1U0 126 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF319Q9P2F9 582 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.06□□□□□ -0.82e-9■■■■■ 40.4
TRAF4-202ENST00000262396 LRP12Q9Y561 859 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 TMEM14AQ9Y6G1 99 aa10.06□□□□□ -0.8
TRAF4-202ENST00000262396 ARRDC5A6NEK1 342 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 RNASEK-C17orf49H0YIS7 233 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 H3BUX3 64 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 CLPXO76031 633 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 TFF1P04155 84 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 MRPL3P09001 348 aaKnown RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ANXA8P13928 327 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ACKR3P25106 362 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 RIDAP52758 137 aaKnown RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 DLX1P56177 255 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 MS4A2Q01362 244 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 EGR3Q06889 387 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 LY6EQ16553 131 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 DGUOKQ16854 277 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ARSJQ5FYB0 599 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF684Q5T5D7 378 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 HAGHLQ6PII5 290 aaPredicted RBP10.05□□□□□ -0.8
TRAF4-202ENST00000262396 ZNF788Q6ZQV5 615 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 PRSS45Q7RTY3 260 aa10.05□□□□□ -0.8
TRAF4-202ENST00000262396 PNKDQ8N490 385 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms