RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 CDRT15L2A8MXV6 281 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 TGOLN2O43493 480 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 IL18BPO95998 194 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 MBPP02686 304 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 AMBPP02760 352 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 ISG15P05161 165 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 FREM3P0C091 2139 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 HIST1H1DP16402 221 aaKnown RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 PPM1AP35813 382 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 P2RY2P41231 377 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 RAB38P57729 211 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF117Q03924 483 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 OR10J5Q8NHC4 309 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 RHBDD1Q8TEB9 315 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 SHDQ96IW2 340 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 SPACA7Q96KW9 195 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF700Q9H0M5 742 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 LPAR5Q9H1C0 372 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 MBNL1Q9NR56 388 aaKnown RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 HCFC1R1Q9NWW0 138 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 ANAPC10Q9UM13 185 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 A0A0A6YYD4 124 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 LOC101059948A0A1B0GTJ6 334 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 PRSS37A4D1T9 235 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 METTL12A8MUP2 240 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM14DPA8MWL7 114 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 CYR61O00622 381 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 XRCC2O43543 280 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 RAD51DO75771 328 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 AKT2P31751 481 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 H3F3AP84243 136 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 ACY1Q03154 408 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 GLO1Q04760 184 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 PPA1Q15181 289 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 VITQ6UXI7 678 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 GRASPQ7Z6J2 395 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 HOXB13Q92826 284 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 TAAR8Q969N4 342 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 TM4SF19Q96DZ7 209 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 RCC1LQ96I51 464 aaKnown RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 THOC3Q96J01 351 aaKnown RBP6.39□□□□□ -1.39
CSDE1-201ENST00000261443 SPACA5Q96QH8 159 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 OR2A5Q96R48 311 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 BANF2Q9H503 90 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 G6PC2Q9NQR9 355 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 SLC5A6Q9Y289 635 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 WSB1Q9Y6I7 421 aa6.39□□□□□ -1.39
CSDE1-201ENST00000261443 A6NIZ1 184 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ATXN7O15265 892 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CCL16O15467 120 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 DLEU1O43261 78 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SRSF10O75494 262 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 MPZL1O95297 269 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 DIRAS3O95661 229 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GCGP01275 180 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF93P35789 620 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SNU13P55769 128 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TAS2R46P59540 309 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 RAP1BP61224 184 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ELAVL3Q14576 367 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GPR157Q5UAW9 335 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 C1orf140Q5VVS0 124 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 POMZP3Q6PJE2 187 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.38□□□□□ -1.397e-9■■■□□ 18.5
CSDE1-201ENST00000261443 SLC35E3Q7Z769 313 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF440Q8IYI8 595 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ZFP62Q8NB50 900 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF784Q8NCA9 323 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 OR2G3Q8NGZ4 309 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CYYR1Q96J86 154 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM208Q9BTX3 173 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 OPN3Q9H1Y3 402 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 DKKL1Q9UK85 242 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 MTCH2Q9Y6C9 303 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 B4DEV8 164 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 HRKO00198 91 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 APBB3O95704 486 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GNRH1P01148 92 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 C8AP07357 584 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GUSBP08236 651 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 EDN3P14138 238 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 PNLIPP16233 465 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CTLA4P16410 223 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 FUT3P21217 361 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 MDKP21741 143 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TDGF1P3P51864 188 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 HLA-DRB3P79483 266 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 PDGFRLQ15198 375 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TCEA2Q15560 299 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM176BQ3YBM2 270 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GLIPR1L1Q6UWM5 242 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SULF2Q8IWU5 870 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ADAT3Q96EY9 351 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ARHGAP5-AS1Q96IT6 56 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ADGRG7Q96K78 797 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CCNL2Q96S94 520 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ABHD14AQ9BUJ0 271 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms