RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FYTTD1Q96QD9 318 aaKnown RBP23.96■■□□□ 1.43
CCM2-201ENST00000258781 SELENOIQ9C0D9 397 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 TP63Q9H3D4 680 aaPredicted RBP23.96■■□□□ 1.43
CCM2-201ENST00000258781 ZNF816-ZNF321PA0A0X1KG74 233 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 A0A1B0GUH1 482 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 ARPC1BO15143 372 aaKnown RBP23.96■■□□□ 1.43
CCM2-201ENST00000258781 CD74P04233 296 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 MTCP1P56278 107 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 ZP1P60852 638 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 FAM214BQ7L5A3 538 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 C1QL2Q7Z5L3 287 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 ZNF584Q8IVC4 421 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 STEAP2Q8NFT2 490 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 OR4D10Q8NGI6 311 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 WNT2BQ93097 391 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 BEX2Q9BXY8 128 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 SERPINA5P05154 406 aa23.95■■□□□ 1.42
CCM2-201ENST00000258781 TRAPPC6BQ86SZ2 158 aa23.95■■□□□ 1.42
CCM2-201ENST00000258781 ZBTB8BQ8NAP8 495 aaPredicted RBP23.95■■□□□ 1.42
CCM2-201ENST00000258781 RAB3CQ96E17 227 aa23.95■■□□□ 1.42
CCM2-201ENST00000258781 DMRTB1Q96MA1 342 aa23.95■■□□□ 1.42
CCM2-201ENST00000258781 NBEAQ8NFP9 2946 aa23.95■■□□□ 1.42
CCM2-201ENST00000258781 A0A1W2PP11 408 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 OR14I1A6ND48 311 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 RAB3DO95716 219 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 HIST1H1DP16402 221 aaKnown RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 GNB3P16520 340 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 HIKESHIQ53FT3 197 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 OR8S1Q8NH09 359 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 KCNN3Q9UGI6 736 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 TPRP12270 2363 aaKnown RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 ZNF736B4DX44 427 aaPredicted RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 MGMTP16455 207 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 CCNOP22674 350 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 RBP2P50120 134 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 NKX2-5P52952 324 aaPredicted RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 CBX3Q13185 183 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 MAB21L1Q13394 359 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 KCNJ8Q15842 424 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 ST3GAL2Q16842 350 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 METTL11BQ5VVY1 283 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 DVL3Q92997 716 aaPredicted RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 REPIN1Q9BWE0 567 aaKnown RBP23.94■■□□□ 1.42
CCM2-201ENST00000258781 TM2D1Q9BX74 207 aa23.94■■□□□ 1.42
CCM2-201ENST00000258781 AHRRA9YTQ3 701 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 SOCS1O15524 211 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 CNOT4O95628 575 aaKnown RBP23.93■■□□□ 1.42
CCM2-201ENST00000258781 MALLQ13021 153 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 FCN2Q15485 313 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 PNLIPRP3Q17RR3 467 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 OR51S1Q8NGJ8 323 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 BORCS8Q96FH0 119 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 MED30Q96HR3 178 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 DOCK7Q96N67 2140 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 POU2F3Q9UKI9 436 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 PKD1L2Q7Z442 2459 aa23.93■■□□□ 1.42
CCM2-201ENST00000258781 FUT6P51993 359 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 PRSS12P56730 875 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 TGFBR3Q03167 851 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 OR51T1Q8NGJ9 327 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 OR5M9Q8NGP3 310 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 NUDCD2Q8WVJ2 157 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 GINS4Q9BRT9 223 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 OPA3Q9H6K4 179 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.92■■□□□ 1.421e-6■■■■□ 24.6
CCM2-201ENST00000258781 NPDC1Q9NQX5 325 aaPredicted RBP23.92■■□□□ 1.42
CCM2-201ENST00000258781 SLC7A11Q9UPY5 501 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 ATRXP46100 2492 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 ACACBO00763 2458 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 FAM230AA0A1W2PPH8 454 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 CRYABP02511 175 aaKnown RBP23.92■■□□□ 1.42
CCM2-201ENST00000258781 IL5P05113 134 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 APLNRP35414 380 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 MEF2DQ14814 521 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 ACSF3Q4G176 576 aaPredicted RBP23.92■■□□□ 1.42
CCM2-201ENST00000258781 PLAC9Q5JTB6 97 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 OR2A2Q6IF42 318 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 CCDC36Q8IYA8 594 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 GCNT2Q8N0V5 402 aa23.92■■□□□ 1.42
CCM2-201ENST00000258781 FOXI3A8MTJ6 420 aaPredicted RBP23.91■■□□□ 1.42
CCM2-201ENST00000258781 FCER2P06734 321 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 TMEM225BP0DP42 221 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 CCL2P13500 99 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 SERPINA2P20848 420 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 TMEM50BP56557 158 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 GNG2P59768 71 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 GK2Q14410 553 aaPredicted RBP23.91■■□□□ 1.42
CCM2-201ENST00000258781 ASCL4Q6XD76 172 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 GLDNQ6ZMI3 551 aaPredicted RBP23.91■■□□□ 1.42
CCM2-201ENST00000258781 DACT3Q96B18 629 aaPredicted RBP23.91■■□□□ 1.42
CCM2-201ENST00000258781 METTL9Q9H1A3 318 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 TUBD1Q9UJT1 453 aa23.91■■□□□ 1.42
CCM2-201ENST00000258781 IGKV1-27A0A075B6S5 117 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 MFNGO00587 321 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 SSX5O60225 188 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 CPT2P23786 658 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 ATP1B3P54709 279 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 C9orf106Q8NAJ2 232 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 OR6K3Q8NGY3 331 aa23.9■■□□□ 1.42
CCM2-201ENST00000258781 GPR137Q96N19 417 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms