RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ACOT7LQ6ZUV0 252 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 TIPARPQ7Z3E1 657 aaKnown RBP17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 LHFPL1Q86WI0 220 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 MICU1Q9BPX6 476 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 TM2D1Q9BX74 207 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 PRR13Q9NZ81 148 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 MBD2Q9UBB5 411 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 PADI1Q9ULC6 663 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 DOCK10Q96BY6 2186 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 C13orf42A0A1B0GVH6 325 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 C5orf51A6NDU8 294 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 B8ZZF3 427 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 LGALS8O00214 317 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 SGCEO43556 437 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 DNPH1O43598 174 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 SYNGR3O43761 229 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 IGHEP01854 428 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 APOC1P02654 83 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 CBX5P45973 191 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 LUMP51884 338 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 TUSC1Q2TAM9 212 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZNF774Q6NX45 483 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 PEG10Q86TG7 708 aaKnown RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 GPR137CQ8N3F9 429 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 TMEM185AQ8NFB2 350 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 ALKBH3Q96Q83 286 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 RTBDNQ9BSG5 229 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 ELL3Q9HB65 397 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 GPR173Q9NS66 373 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 DEPPQ9NTK1 212 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 CXCL13O43927 109 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 HTR3BO95264 441 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 FGF2P09038 288 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 PATE4P0C8F1 98 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 PRSS12P56730 875 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 SUPT4H1P63272 117 aaKnown RBP17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZXDAP98168 799 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 RAB35Q15286 201 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 TCEAL6Q6IPX3 200 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 KCNE4Q8WWG9 221 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 TCEAL3Q969E4 200 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 C10orf35Q96D05 121 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 TMEM38BQ9NVV0 291 aa17.06■□□□□ 0.32
CDC42EP1-201ENST00000249014 CRHP06850 196 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 ACP1P24666 158 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 CLDN15P56746 228 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SLC9A3R2Q15599 337 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 WIPI1Q5MNZ9 446 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 CLEC18BQ6UXF7 455 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SLC38A6Q8IZM9 456 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 ESX1Q8N693 406 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 GALNT11Q8NCW6 608 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 CSNK2A3Q8NEV1 391 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 OR52H1Q8NGJ2 320 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 THAP6Q8TBB0 222 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 CT55Q8WUE5 264 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 S100A13Q99584 98 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SLC25A32Q9H2D1 315 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 RASL12Q9NYN1 266 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 OSGIN2Q9Y236 505 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 F10P00742 488 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 GP1BAP07359 652 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 B4GALT1P15291 398 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 FPR2P25090 351 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 OR3A2P47893 321 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 ACER2Q5QJU3 275 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 DRAM2Q6UX65 266 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 GALNTL5Q7Z4T8 443 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 C6orf201Q7Z4U5 140 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 GLRX5Q86SX6 157 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 BVESQ8NE79 360 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SEMA6DQ8NFY4 1073 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 ADGRG7Q96K78 797 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 GPR160Q9UJ42 338 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 LOXL2Q9Y4K0 774 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 SESN1Q9Y6P5 492 aa17.05■□□□□ 0.32
CDC42EP1-201ENST00000249014 PINLYPA6NC86 204 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 TRAPPC6AO75865 159 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 SFT2D2O95562 160 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 ICAM2P13598 275 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 CPT2P23786 658 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 NUP62P37198 522 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 H3F3CQ6NXT2 135 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 TMEM105Q8N8V8 129 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 OR10D3Q8NH80 312 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 REEP6Q96HR9 211 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZNF471Q9BX82 626 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 CHMP1AQ9HD42 196 aaPredicted RBP17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 EHFQ9NZC4 300 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 MCTS1Q9ULC4 181 aaKnown RBP17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 IGKV1D-8A0A087WSZ0 117 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 SERPINE3A8MV23 424 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 ADAP1O75689 374 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 CST2P09228 141 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZNF32P17041 273 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 GABRR1P24046 479 aa17.04■□□□□ 0.32
CDC42EP1-201ENST00000249014 PSMB6P28072 239 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms