RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RAD52P43351 418 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CASP6P55212 293 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 UCP2P55851 309 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 PPP1CBP62140 327 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MOB3CQ70IA8 216 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MYPOPQ86VE0 399 aaPredicted RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 ZDHHC23Q8IYP9 409 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ZSCAN4Q8NAM6 433 aaPredicted RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 OR56B1Q8NGI3 324 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 OR52I2Q8NH67 350 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ENKURQ8TC29 256 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 NPRL2Q8WTW4 380 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 LPAR5Q9H1C0 372 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 AUNIPQ9H7T9 357 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 IL36GQ9NZH8 169 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MRPL15Q9P015 296 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 JKAMPQ9P055 326 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 NOP16Q9Y3C1 178 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 BSNQ9UPA5 3926 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 IGF2RP11717 2491 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 PRRC2CQ9Y520 2896 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 ANKRD30BLA7E2S9 258 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 H7C417 338 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MELTFP08582 738 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CECR9P0C854 216 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ACTBP60709 375 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 ACTG1P63261 375 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 PRDX4Q13162 271 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 KLF9Q13886 244 aaPredicted RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 HLXQ14774 488 aaPredicted RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 ARL6IP1Q15041 203 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 CEACAM21Q3KPI0 293 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 OR10K2Q6IF99 312 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 FAM89BQ8N5H3 189 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 OR5A2Q8NGI9 324 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 DMRTA2Q96SC8 542 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 PAPOLGQ9BWT3 736 aaKnown RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 TM2D1Q9BX74 207 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 METTL9Q9H1A3 318 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 POFUT1Q9H488 388 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 MTFP1Q9UDX5 166 aa12.22□□□□□ -0.45
SDF2-201ENST00000247020 ZNF107Q9UII5 783 aaPredicted RBP12.22□□□□□ -0.45
SDF2-201ENST00000247020 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
SDF2-201ENST00000247020 FAM230AA0A1W2PPH8 454 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 ANKRD20A5PA0PJZ0 165 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 ZNF850A8MQ14 1090 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 RBBP9O75884 186 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 MPIG6BO95866 241 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 CSF1P09603 554 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 FAM157BP0CG42 384 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 BMP5P22003 454 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 SAXO1Q8IYX7 474 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 GPX8Q8TED1 209 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 AQP3Q92482 292 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 COPZ2Q9P299 210 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 ING4Q9UNL4 249 aa12.21□□□□□ -0.46
SDF2-201ENST00000247020 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 LINC00854A0A1B0GVQ3 168 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 PQLC2LA1A4F0 135 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 FUOMA2VDF0 154 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 OR5B21A6NL26 309 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 IQCF6A8MYZ5 107 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 CRTAPO75718 401 aaPredicted RBP12.2□□□□□ -0.46
SDF2-201ENST00000247020 AGFG2O95081 481 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 LPLP06858 475 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 GSTP1P09211 210 aaKnown RBP12.2□□□□□ -0.46
SDF2-201ENST00000247020 SPNP16150 400 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 MGMTP16455 207 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 CPT2P23786 658 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 SLC6A1P30531 599 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 BCAP31P51572 246 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 PPA1Q15181 289 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 SLC22A6Q4U2R8 563 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 ACBD4Q8NC06 268 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 TMEM104Q8NE00 496 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 OR1J1Q8NGS3 322 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 RND1Q92730 232 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 S100PBPQ96BU1 408 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 PPP1R14BQ96C90 147 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.2□□□□□ -0.46
SDF2-201ENST00000247020 GPR160Q9UJ42 338 aa12.2□□□□□ -0.46
SDF2-201ENST00000247020 IGHV2OR16-5A0A0B4J2B6 119 aa12.19□□□□□ -0.46
SDF2-201ENST00000247020 MED19A0JLT2 244 aaPredicted RBP12.19□□□□□ -0.46
SDF2-201ENST00000247020 EEF1E1-BLOC1S5C9J1V9 151 aa12.19□□□□□ -0.46
SDF2-201ENST00000247020 AKR7A2O43488 359 aa12.19□□□□□ -0.46
SDF2-201ENST00000247020 TMEM225BP0DP42 221 aa12.19□□□□□ -0.46
SDF2-201ENST00000247020 CA7P43166 264 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms