RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PNLIPRP3Q17RR3 467 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 S100A13Q99584 98 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 POFUT1Q9H488 388 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 PTTG3PQ9NZH4 202 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 PIPOXQ9P0Z9 390 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 MGAT4AQ9UM21 535 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 HSPB11Q9Y547 144 aa16.04■□□□□ 0.16
HOXC11-201ENST00000243082 FAM230AA0A1W2PPH8 454 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 DISC1C4P0D8 188 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 IGHG3P01860 377 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 COX5BP10606 129 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 PRKACBP22694 351 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 HRH1P35367 487 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 SNRPD2P62316 118 aaKnown RBP16.03■□□□□ 0.16
HOXC11-201ENST00000243082 CLN3Q13286 438 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 SCGB2B2Q4G0G5 96 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 MUC20Q8N307 709 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-201ENST00000243082 STEAP2Q8NFT2 490 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 ZNF431Q8TF32 576 aaPredicted RBP16.03■□□□□ 0.16
HOXC11-201ENST00000243082 SNAPC3Q92966 411 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 C12orf49Q9H741 205 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 DLL3Q9NYJ7 618 aa16.03■□□□□ 0.16
HOXC11-201ENST00000243082 TMEM82A0PJX8 343 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 GSTT2P0CG29 244 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 TMEM225BP0DP42 221 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 NAT1P18440 290 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 CXADRP78310 365 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 CAMK2BQ13554 666 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 DEFB109BQ30KR1 87 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 ATPAF1Q5TC12 328 aaPredicted RBP16.02■□□□□ 0.16
HOXC11-201ENST00000243082 MRGPRFQ96AM1 343 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 GON7Q9BXV9 100 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 ELL3Q9HB65 397 aaPredicted RBP16.02■□□□□ 0.16
HOXC11-201ENST00000243082 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.02■□□□□ 0.16
HOXC11-201ENST00000243082 ZNF175Q9Y473 711 aa16.02■□□□□ 0.16
HOXC11-201ENST00000243082 ZNHIT1O43257 154 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 WISP2O76076 250 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 CD79AP11912 226 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 CCL2P13500 99 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 RAB1AP62820 205 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 OR2T35Q8NGX2 323 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 PRRT1Q99946 306 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 OCSTAMPQ9BR26 566 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 GP6Q9HCN6 339 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 PLEKHA6Q9Y2H5 1048 aa16.02■□□□□ 0.15
HOXC11-201ENST00000243082 ZFHX2Q9C0A1 2572 aaPredicted RBP16.02■□□□□ 0.15
HOXC11-201ENST00000243082 UBE2QL1A1L167 161 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 C5orf49A4QMS7 147 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 IL18BPO95998 194 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 TBPP20226 339 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 CCNOP22674 350 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 DNASE1P24855 282 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 BLVRBP30043 206 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 RBP2P50120 134 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 C2orf68Q2NKX9 166 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 LHFPL2Q6ZUX7 228 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 BORCS8Q96FH0 119 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 PECRQ9BY49 303 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 CHIAQ9BZP6 476 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 MYOZ1Q9NP98 299 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ARHGAP21Q5T5U3 1957 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 CFAP47Q6ZTR5 3102 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 RIF1Q5UIP0 2472 aaKnown RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 TRAV17A0A0B4J275 112 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ZNF816-ZNF321PA0A0X1KG74 233 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 SPRY1O43609 319 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ANGPTL7O43827 346 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ZNF780AO75290 641 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 OR2A4O95047 310 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 OR4E1P0C645 316 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ARR3P36575 388 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 UBE2MP61081 183 aaKnown RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 RTP5Q14D33 572 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 C4orf46Q504U0 113 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 FBXW9Q5XUX1 488 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ASCL4Q6XD76 172 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 SLC7A5P1Q8MH63 180 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ST8SIA4Q92187 359 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 FBXW5Q969U6 566 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 CPNE2Q96FN4 548 aaPredicted RBP16.01■□□□□ 0.15
HOXC11-201ENST00000243082 Q96M66 194 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 OR2A7Q96R45 310 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 PRRX2Q99811 253 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 METTL9Q9H1A3 318 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 ITGB1BP2Q9UKP3 347 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 VSIG4Q9Y279 399 aa16.01■□□□□ 0.15
HOXC11-201ENST00000243082 FAM186AA6NE01 2351 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 ZNF891A8MT65 544 aaPredicted RBP16■□□□□ 0.15
HOXC11-201ENST00000243082 CEACAM4O75871 244 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 PMP2P02689 132 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 GIPP09681 153 aaPredicted RBP16■□□□□ 0.15
HOXC11-201ENST00000243082 CPT2P23786 658 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 MPGP29372 298 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 ZMYND11Q15326 602 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 TMED4Q7Z7H5 227 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 OR1K1Q8NGR3 316 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 OR4K15Q8NH41 348 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 GRPEL2Q8TAA5 225 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 CCDC107Q8WV48 283 aa16■□□□□ 0.15
HOXC11-201ENST00000243082 PIGCQ92535 297 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms