RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TMEM14DPA8MWL7 114 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 I3L521 148 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 TP53I11O14683 189 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 SPRY2O43597 315 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 TLX3O43711 291 aaPredicted RBP6.88□□□□□ -1.31
CXCR4-201ENST00000241393 EFNA2O43921 213 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 UBBP0CG47 229 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 CLDN6P56747 220 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 HIST3H3Q16695 136 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 RNASE10Q5GAN6 216 aaKnown RBP6.88□□□□□ -1.31
CXCR4-201ENST00000241393 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 C11orf88Q6PI97 169 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 SLC25A42Q86VD7 318 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 GALNT16Q8N428 558 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 BEND2Q8NDZ0 799 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 CCDC54Q8NEL0 328 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 OR10S1Q8NGN2 331 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 OR5M8Q8NGP6 311 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 OR2AJ1Q8NGZ0 328 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 OR8S1Q8NH09 359 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 LRRC20Q8TCA0 184 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 PTGES2Q9H7Z7 377 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 LPAR3Q9UBY5 353 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 KLK13Q9UKR3 277 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 ANAPC10Q9UM13 185 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 UNC80Q8N2C7 3258 aa6.88□□□□□ -1.31
CXCR4-201ENST00000241393 CABIN1Q9Y6J0 2220 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FXYD6-FXYD2A0A087WZ82 144 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 A0A0D9SG52 128 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 IGHV5-10-1A0A0J9YXX1 117 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 A0A1B0GW55 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 A0A1W2PQM1 296 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 MEIS3P1A6NDR6 274 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ARPC5O15511 151 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L2P0CJ85 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L3P0CJ86 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L4P0CJ87 422 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L5P0CJ88 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L6P0CJ89 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4L7P0CJ90 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FGF5P12034 268 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 SLC25A4P12235 298 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF133P52736 654 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 UBE2MP61081 183 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LSM6P62312 80 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GRB2P62993 217 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 SLC35A1P78382 337 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CCL7P80098 99 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DHRS2Q13268 280 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GK2Q14410 553 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF345Q14585 488 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 C2orf68Q2NKX9 166 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ACTBL2Q562R1 376 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LY6G6FQ5SQ64 297 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DCAF12L2Q5VW00 463 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LYSMD4Q5XG99 296 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FAM90A2PQ658T7 463 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LIN54Q6MZP7 749 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GUSBP11Q6P575 273 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CORO6Q6QEF8 472 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GSG1LQ6UXU4 331 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 RFPL4BQ6ZWI9 263 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CHMP1BQ7LBR1 199 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GPAT4Q86UL3 456 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FJX1Q86VR8 437 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 WDFY1Q8IWB7 410 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR10G3Q8NGC4 313 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR4K17Q8NGC6 315 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR52N4Q8NGI2 321 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR1J2Q8NGS2 313 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR13C8Q8NGS7 320 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ELP5Q8TE02 316 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 SAP25Q8TEE9 199 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 RBPMSQ93062 196 aaKnown RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ADAT3Q96EY9 351 aaPredicted RBP6.87□□□□□ -1.31
CXCR4-201ENST00000241393 WBP1Q96G27 269 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 WDYHV1Q96HA8 205 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DEFB126Q9BYW3 111 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CHST6Q9GZX3 395 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 MFFQ9GZY8 342 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 ARL6Q9H0F7 186 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 FXYD6Q9H0Q3 95 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 GHRLQ9UBU3 117 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DUX4Q9UBX2 424 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 POLR1DQ9Y2S0 133 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LHFPL6Q9Y693 200 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 U3KQA8 63 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 CACNA1EQ15878 2313 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 H0YIZ8 118 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 DHHO43323 396 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 LMX1BO60663 402 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR2J2O76002 312 aa6.87□□□□□ -1.31
CXCR4-201ENST00000241393 OR2F2O95006 317 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms