RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TSTD3H0UI37 97 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 SSSCA1O60232 199 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 ICMTO60725 284 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 EXOSC2Q13868 293 aaKnown RBP10.29□□□□□ -0.76
NOD1-201ENST00000222823 KISS1Q15726 138 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 CDC20BQ86Y33 519 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 MAGT1Q9H0U3 335 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 EXOGQ9Y2C4 368 aaKnown RBP10.29□□□□□ -0.76
NOD1-201ENST00000222823 CHD5Q8TDI0 1954 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 SCN3AQ9NY46 2000 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 PLXNA3P51805 1871 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 TRGV8A0A0C4DH27 118 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 MAGEB1P43366 347 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 RAC1P63000 192 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 ZNF321PQ8N8H1 164 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 LHX4Q969G2 390 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 SLC35E1Q96K37 410 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 LRRC3BQ96PB8 259 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 TSPAN32Q96QS1 320 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 OPA3Q9H6K4 179 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 NDRG3Q9UGV2 375 aa10.29□□□□□ -0.76
NOD1-201ENST00000222823 TERTO14746 1132 aaKnown RBP10.28□□□□□ -0.76
NOD1-201ENST00000222823 AVPR2P30518 371 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 GNG3P63215 75 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 FUT7Q11130 342 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 RAB35Q15286 201 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 OR5M9Q8NGP3 310 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 C20orf24Q9BUV8 137 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 C12orf10Q9HB07 376 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 MED9Q9NWA0 146 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 RNF150Q9ULK6 438 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 A0A1W2PPV9 198 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 IL5P05113 134 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 LIMS1P48059 325 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 OR2A2Q6IF42 318 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 ZNF770Q6IQ21 691 aaPredicted RBP10.28□□□□□ -0.76
NOD1-201ENST00000222823 EXTL1Q92935 676 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 VSTM2LQ96N03 204 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 TECTBQ96PL2 329 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 MTFP1Q9UDX5 166 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 CCDC88CQ9P219 2028 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 KLK10O43240 276 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 EML2O95834 649 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 MGST1P10620 155 aaKnown RBP10.28□□□□□ -0.76
NOD1-201ENST00000222823 SMIM21Q3B7S5 101 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 C17orf107Q6ZR85 190 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 NAA40Q86UY6 237 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 OR10X1Q8NGY0 326 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 BSCL2Q96G97 398 aaPredicted RBP10.28□□□□□ -0.76
NOD1-201ENST00000222823 UQCC2Q9BRT2 126 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 COMMD5Q9GZQ3 224 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 SLC25A32Q9H2D1 315 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 SLC17A5Q9NRA2 495 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 PTPRDP23468 1912 aa10.28□□□□□ -0.76
NOD1-201ENST00000222823 GALR2O43603 387 aaPredicted RBP10.27□□□□□ -0.76
NOD1-201ENST00000222823 RPS2P15880 293 aaKnown RBP10.27□□□□□ -0.76
NOD1-201ENST00000222823 ZNF32P17041 273 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 GPM6AP51674 278 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 P2RX3P56373 397 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 PDZK1IP1Q13113 114 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 RGS7BPQ6MZT1 257 aaPredicted RBP10.27□□□□□ -0.76
NOD1-201ENST00000222823 OR10Z1Q8NGY1 313 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 PLSCR3Q9NRY6 295 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 QPCTLQ9NXS2 382 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 ZNF391Q9UJN7 358 aa10.27□□□□□ -0.76
NOD1-201ENST00000222823 NUDT19A8MXV4 375 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 H3BMH7 237 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 ABCD4O14678 606 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 TOX3O15405 576 aaPredicted RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 NDUFB6O95139 128 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 CD37P11049 281 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 C1QL3Q5VWW1 255 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 SMIM15Q7Z3B0 74 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 ADPRHL1Q8NDY3 354 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 NUBPLQ8TB37 319 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 C14orf79Q96F83 325 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 CHST6Q9GZX3 395 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 OR5V1Q9UGF6 321 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 H7BYZ3 331 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 PLPP3O14495 311 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 YIF1AO95070 293 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 ZIC2O95409 532 aaPredicted RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 EFEMP2O95967 443 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 ERGP11308 486 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 IL9P15248 144 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 SSPNQ14714 243 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 CD226Q15762 336 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 HAGHQ16775 308 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 CDONQ4KMG0 1287 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 C1orf210Q8IVY1 113 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 TCTE3Q8IZS6 198 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 LAMP3Q9UQV4 416 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 STRAPQ9Y3F4 350 aaKnown RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 MYLKQ15746 1914 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 SPINT1O43278 529 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 DHRS3O75911 302 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 IAPPP10997 89 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms