RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZFP62Q8NB50 900 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 ZBTB34Q8NCN2 500 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 OR52N4Q8NGI2 321 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 OR51E1Q8TCB6 317 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 UBE2FQ969M7 185 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CLDN23Q96B33 292 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 POM121Q96HA1 1249 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 DYNLRB1Q9NP97 96 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 DNAJB12Q9NXW2 375 aaKnown RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 ZMAT5Q9UDW3 170 aaKnown RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 SLC45A2Q9UMX9 530 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 LRP12Q9Y561 859 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CABIN1Q9Y6J0 2220 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 FAM186AA6NE01 2351 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 FGF17O60258 216 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CTRB1P17538 263 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 DCTDP32321 178 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 KIAA0040Q15053 153 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 GUK1Q16774 197 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 RPEL1Q2QD12 228 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CTRB2Q6GPI1 263 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 C9orf62Q8N4C0 152 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CADM4Q8NFZ8 388 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 OR1F12Q8NHA8 337 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 TMEM190Q8WZ59 177 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 ZNF707Q96C28 371 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 BSCL2Q96G97 398 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 CGGBP1Q9UFW8 167 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 ST3GAL6Q9Y274 331 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 ALG1L2C9J202 215 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CA11O75493 328 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CTSDP07339 412 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 SULT1A2P50226 295 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 C6orf15Q6UXA7 325 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 RBM45Q8IUH3 476 aaKnown RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 TCTEX1D1Q8N7M0 179 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CNEP1R1Q8N9A8 125 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
CHD9-201ENST00000219084 ST6GAL2Q96JF0 529 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 HHIPQ96QV1 700 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 SHARPINQ9H0F6 387 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 SLCO1C1Q9NYB5 712 aa3.97□□□□□ -1.77
CHD9-201ENST00000219084 CLEC18AA5D8T8 446 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 GPANK1O95872 356 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 PVRP15151 417 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 GALR1P47211 349 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 ST3GAL2Q16842 350 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 ZNF761Q86XN6 746 aaPredicted RBP3.96□□□□□ -1.77
CHD9-201ENST00000219084 FAM219AQ8IW50 185 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 CLEC18CQ8NCF0 446 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 OR5D13Q8NGL4 314 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 OR8D4Q8NGM9 314 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 RAB24Q969Q5 203 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 NARFLQ9H6Q4 476 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 RNF167Q9H6Y7 350 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.96□□□□□ -1.77
CHD9-201ENST00000219084 TBC1D29Q9UFV1 150 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 MAP1BP46821 2468 aaKnown RBP3.96□□□□□ -1.77
CHD9-201ENST00000219084 NCKAP5O14513 1909 aa3.96□□□□□ -1.77
CHD9-201ENST00000219084 LMO7DNF2Z398 122 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 GAPDHP04406 335 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 HAGHQ16775 308 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PRAMEF5Q5TYX0 476 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PRAMEF6Q5VXH4 476 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 DMKNQ6E0U4 476 aaPredicted RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 BCDIN3DQ7Z5W3 292 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 UBALD2Q8IYN6 164 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 FAM122AQ96E09 287 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 NAT8Q9UHE5 227 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TRBV5-3A0A0A0MS03 114 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 AKR7A3O95154 331 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 HLA-DQB1P01920 261 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 SPNP16150 400 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 RHOBP62745 196 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 DMWDQ09019 674 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TMEM241Q24JQ0 296 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 GTF2H5Q6ZYL4 71 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 NUBPLQ8TB37 319 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 MTCH1Q9NZJ7 389 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 CDC14CA4D256 554 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 C1QAP02745 245 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZNF17P17021 662 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PTGFRP43088 359 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PKIAP61925 76 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZNF542PQ5EBM4 170 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 MSRB3Q8IXL7 192 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 C20orf196Q8IYI0 205 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR10X1Q8NGY0 326 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 MARCH1Q8TCQ1 289 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 HSD17B8Q92506 261 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ERGIC1Q969X5 290 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZDHHC11Q9H8X9 412 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 Q9N2K0 584 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TAAR3PQ9P1P4 343 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 C7orf66A4D0T2 115 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ETHE1O95571 254 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 CDS2O95674 445 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR10J4P0C629 311 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms