RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ANKRD33Q7Z3H0 272 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 RABEPKQ7Z6M1 372 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 POC1AQ8NBT0 407 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 OR5D18Q8NGL1 313 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 TSLPQ969D9 159 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 TP53RKQ96S44 253 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 PELI2Q9HAT8 420 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 TMEM14AQ9Y6G1 99 aa13.02□□□□□ -0.32
PTPRA-201ENST00000216877 A0A087WUJ7 227 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 HPRT1P00492 218 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 CARD18P57730 90 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 SSPNQ14714 243 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 LINC01590Q5TEZ4 76 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
PTPRA-201ENST00000216877 TMEM230Q96A57 120 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 MS4A10Q96PG2 267 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 OR5B12Q96R08 314 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 CNTD2Q9H8S5 307 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 KIF26AQ9ULI4 1882 aaPredicted RBP13.02□□□□□ -0.33
PTPRA-201ENST00000216877 COL4A6Q14031 1691 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 A0A0B4J2E0 115 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 A0A1B0GX12 115 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 NUDT14O95848 222 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF41P51814 821 aaPredicted RBP13.02□□□□□ -0.33
PTPRA-201ENST00000216877 INSM1Q01101 510 aaPredicted RBP13.02□□□□□ -0.33
PTPRA-201ENST00000216877 CLEC2AQ6UVW9 174 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 MCHR2Q969V1 340 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 MSL2Q9HCI7 577 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 C1orf123Q9NWV4 160 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 RHBDD3Q9Y3P4 386 aa13.02□□□□□ -0.33
PTPRA-201ENST00000216877 TP53I11O14683 189 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 DNAJB6O75190 326 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CSTAP01040 98 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CD1AP06126 327 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 FOLR1P15328 257 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CXCR1P25024 350 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 HSD11B2P80365 405 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 HOGA1Q86XE5 327 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SULF2Q8IWU5 870 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 VN1R2Q8NFZ6 395 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SCARF2Q96GP6 870 aaPredicted RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 PATZ1Q9HBE1 687 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 OR52A1Q9UKL2 312 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SLC16A7O60669 478 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 TMEM127O75204 238 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 TK1P04183 234 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SEC11BP0C7V7 166 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CEACAM8P31997 349 aaPredicted RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 RAB7AP51149 207 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 METAP1P53582 386 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 MFGE8Q08431 387 aaPredicted RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 FBXW12Q6X9E4 464 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 MEX3BQ6ZN04 569 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF595Q8IYB9 648 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 OR4N2Q8NGD1 307 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 OR13D1Q8NGV5 346 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CXorf40AQ8TE69 158 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF385AQ96PM9 386 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 GINS3Q9BRX5 216 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 ADAM29Q9UKF5 820 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 M0QZK8 103 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 HSD17B6O14756 317 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 GGCTO75223 188 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CYB5R3P00387 301 aaPredicted RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 SCAND1P57086 179 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 MRPS34P82930 218 aaKnown RBP13.01□□□□□ -0.33
PTPRA-201ENST00000216877 CLN3Q13286 438 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF260Q3ZCT1 412 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 TMEM25Q86YD3 366 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 IL22RA1Q8N6P7 574 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 RSC1A1Q92681 617 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 GPR132Q9UNW8 380 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 MYOFQ9NZM1 2061 aa13.01□□□□□ -0.33
PTPRA-201ENST00000216877 KIAA1671Q9BY89 1806 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 HMGA1P17096 107 aaKnown RBP13□□□□□ -0.33
PTPRA-201ENST00000216877 CHRNB4P30926 498 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 SLC37A1P57057 533 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 TRA2BP62995 288 aaKnown RBP13□□□□□ -0.33
PTPRA-201ENST00000216877 SPEM2Q0P670 501 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 GGTLC2Q14390 218 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 MPV17LQ2QL34 196 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 ABCA11PQ4W5N1 156 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 HIKESHIQ53FT3 197 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 TSPO2Q5TGU0 170 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 ZNF547Q8IVP9 402 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 ASB5Q8WWX0 329 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 AICDAQ9GZX7 198 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 Q9N2J8 555 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 TCRBV21S2A2A0A5A6 115 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 MEGF11A6BM72 1044 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 EPHA1P21709 976 aa13□□□□□ -0.33
PTPRA-201ENST00000216877 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms