RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRSS36Q5K4E3 855 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 RBM45Q8IUH3 476 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 GRAMD2BQ96HH9 432 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 PHF3Q92576 2039 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 C19orf57Q0VDD7 668 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 LIPNQ5VXI9 398 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 OR10V1Q8NGI7 309 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 PACRGQ96M98 296 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 FOXC2Q99958 501 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM9BQ9NQ34 198 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 A0A1B0GTW7 788 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 M0R082 166 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 BCL2L11O43521 198 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 LIMS3P0CW19 117 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 LIMS4P0CW20 117 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 FKBP2P26885 142 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 CXorf67Q86X51 503 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 GPA33Q99795 319 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 NRSN2Q9GZP1 204 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 LYZP61626 148 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 PDPNQ86YL7 162 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 FAM26EQ8N5C1 309 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM251Q8N6I4 163 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 NUDCD2Q8WVJ2 157 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF121P58317 390 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 CD226Q15762 336 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 OSR2Q8N2R0 312 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 GALNT16Q8N428 558 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 FAM24BQ8N5W8 94 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 OR5R1Q8NH85 324 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 MMP24Q9Y5R2 645 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 DHRS7CA6NNS2 312 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 CST5P28325 142 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 LYPD8Q6UX82 237 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 HDAC8Q9BY41 377 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 OR2A25A4D2G3 310 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 C1QTNF3Q9BXJ4 246 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 CXorf36Q9H7Y0 433 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 RAB32Q13637 225 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 EMC4Q5J8M3 183 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 FAM78BQ5VT40 261 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 SLC25A26Q70HW3 274 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 CD3DP04234 171 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 ZP3P21754 424 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 ADPRHL1Q8NDY3 354 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 TMPRSS13Q9BYE2 586 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 FZR1Q9UM11 496 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 WDR81Q562E7 1941 aa13.22□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM238LA0A1B0GVL6 79 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 A6NJY4 79 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 M0QZK8 103 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 GGCTO75223 188 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 HRASP01112 189 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 CEACAM6P40199 344 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 PLP1P60201 277 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.21□□□□□ -0.296e-11■■■■■ 35.6
SPTLC2-201ENST00000216484 NANOGP1Q8N7R0 232 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 TIAM2Q8IVF5 1701 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 IGHV3-20A0A0C4DH32 117 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 PPIHO43447 177 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 HIST3H3Q16695 136 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 VMA21Q3ZAQ7 101 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 SLC35B3Q9H1N7 401 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 TRAT1Q6PIZ9 186 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 ZDBF2Q9HCK1 2354 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 SYT14P1Q58G82 188 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 FGF13Q92913 245 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 IL17CQ9P0M4 197 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 A0A1B0GX78 115 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 NAT1P18440 290 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 LIPAP38571 399 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM191AQ9H0A3 160 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF391Q9UJN7 358 aa13.21□□□□□ -0.29
SPTLC2-201ENST00000216484 MED19A0JLT2 244 aaPredicted RBP13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 T-ENOLP0DO92 83 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 CARFQ8N187 725 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 IL36GQ9NZH8 169 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 FGF2P09038 288 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 ASAH1Q13510 395 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 KCNAB1Q14722 419 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF502Q8TBZ5 544 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 CDCA3Q99618 268 aaPredicted RBP13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 ABHD14AQ9BUJ0 271 aa13.21□□□□□ -0.3
SPTLC2-201ENST00000216484 TLCD2A6NGC4 264 aa13.2□□□□□ -0.3
SPTLC2-201ENST00000216484 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms