RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 ERGIC1Q969X5 290 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 SMDT1Q9H4I9 107 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 FOXD3Q9UJU5 478 aaPredicted RBP13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 MEMO1Q9Y316 297 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 STRAPQ9Y3F4 350 aaKnown RBP13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 NUDT21O43809 227 aaKnown RBP13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 PI3P19957 117 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 ERVFC1-1P60608 527 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 ARSJQ5FYB0 599 aaPredicted RBP13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 CHST4Q8NCG5 386 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 TAS2R4Q9NYW5 299 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 RAB22AQ9UL26 194 aa13.15□□□□□ -0.3
TMEM38A-201ENST00000187762 DCDC2BA2VCK2 349 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 TP53I11O14683 189 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 ZNF264O43296 627 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 PRKNO60260 465 aaPredicted RBP13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 CRTAPO75718 401 aaPredicted RBP13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 OR4A8P0C604 315 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 CEBPGP53567 150 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 GLO1Q04760 184 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 HAGHQ16775 308 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 Q6ZSR6 202 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 GAL3ST4Q96RP7 486 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SYT3Q9BQG1 590 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 CCDC3Q9BQI4 270 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 TGOLN2O43493 480 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 GIMD1P0DJR0 217 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 C1orf87Q8N0U7 546 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC22A18ASQ8N1D0 253 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 OR13H1Q8NG92 308 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 OR6N2Q8NGY6 317 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC37A2Q8TED4 501 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 METTL21AQ8WXB1 218 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC22A13Q9Y226 551 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 SPEGQ15772 3267 aa13.14□□□□□ -0.31
TMEM38A-201ENST00000187762 A0A0J9YY10 115 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 ZNF217O75362 1048 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 PGA3P0DJD8 388 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 TBPP20226 339 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 EPHA1P21709 976 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 CTHP32929 405 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 OR3A1P47881 315 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 TRA2AQ13595 282 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 LRRC69Q6ZNQ3 347 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 ZNF429Q86V71 674 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 ZNF283Q8N7M2 679 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 OR51A2Q8NGJ7 313 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 PRRX2Q99811 253 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 CKLFQ9UBR5 152 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 OR52A1Q9UKL2 312 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 DHDHQ9UQ10 334 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 OR5AC1P0C628 307 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 ALOX5APP20292 161 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 GNALP38405 381 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC25A1P53007 311 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 RAB38P57729 211 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 HERPUD1Q15011 391 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 TEX38Q6PEX7 206 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 DPY19L4Q7Z388 723 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 SH3BGRL3Q9H299 93 aa13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 SRA1Q9HD15 236 aaKnown RBP13.13□□□□□ -0.31
TMEM38A-201ENST00000187762 RBFOX3A6NFN3 312 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 M0QZK8 103 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 GGCTO75223 188 aaKnown RBP13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 DEDDO75618 318 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 TK1P04183 234 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC35E2P0CK97 266 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 CLDN6P56747 220 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 PAX5Q02548 391 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 EGR3Q06889 387 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 C1orf61Q13536 156 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 ZNF774Q6NX45 483 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 SLC35D2Q76EJ3 337 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 FAM213BQ8TBF2 198 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 PPP1R14AQ96A00 147 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 WDR76Q9H967 626 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 LRIT1Q9P2V4 623 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 TRIOO75962 3097 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 BORCS7-ASMTA0A0B4J1R7 106 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 SRP19P09132 144 aaKnown RBP13.12□□□□□ -0.31
TMEM38A-201ENST00000187762 APOBEC1P41238 236 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms