RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Kiss1rQ91V45 396 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Nt5dc2Q91X76 390 aaKnown RBP9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Prb1Q91X93 504 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tmem63aQ91YT8 804 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Hcfc1r1Q9CYQ5 120 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Aurkaip1Q9DCJ7 200 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Fn3kQ9ER35 309 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 SncgQ9Z0F7 123 aaKnown RBP9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Obp1bA2AEP0 171 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm14743A2BHD2 171 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Hbb-bh1P04444 147 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Klk1b5P15945 261 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Mmp2P33434 662 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 InmtP40936 264 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Cdk5r1P61809 307 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Kcnj3P63250 501 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 B4galnt1Q09200 533 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr18Q0VAX9 331 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr733Q14AK5 308 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tas2r116Q7M713 305 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr201Q7TS38 308 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Mospd3Q8BGG6 235 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Prelid1Q8R107 217 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Vmn1r35Q8R2E2 296 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Cadm4Q8R464 388 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Dusp18Q8VE01 188 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr836Q8VFJ3 317 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Polr2hQ923G2 150 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Isyna1Q9JHU9 557 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 ReckQ9Z0J1 971 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm45716A0A1B0GRQ0 93 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Dgat2l6A2ADU8 337 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ms4a7E9Q9V5 267 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Lipo5F6QKH6 233 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm6460F6YJZ8 199 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Kcns1O35173 497 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Slc18a3O35304 530 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tbxa2rP30987 341 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Apoc1P34928 88 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Nkx2-2P42586 273 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Acyp2P56375 106 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 ActbP60710 375 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Crabp1P62965 137 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Actg1P63260 375 aaKnown RBP9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ces2fQ08ED5 561 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gls2Q571F8 602 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr517Q7TRU4 314 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Zfp955aQ80XR7 545 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Zfp790Q80ZX2 779 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr97Q8VFE1 310 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr732Q8VFT5 308 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr1099Q8VG37 312 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr584Q8VGW0 319 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ints12Q9D168 461 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Arl6ip1Q9JKW0 203 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ubl3Q9Z2M6 117 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm17087V9GXQ2 156 aa9.8□□□□□ -0.84
Msh3-201ENSMUST00000022220 A0A1Y7VIT9 351 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm29776A0A286YEC0 699 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ccdc74aE9Q9U8 364 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm8356J3QPD3 205 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Fbxw15L7N1X6 466 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Prdx6O08709 224 aaKnown RBP9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 KitlgP20826 273 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ccr1l1P51676 356 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Fndc4Q3TR08 231 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 1700066B19RikQ3TS39 127 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Isg20l2Q3U1G5 368 aaKnown RBP9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 ScimpQ3UU41 150 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Repin1Q5U4E2 545 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tmem255aQ8BHW5 351 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr434Q8VF17 321 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr1309Q8VF83 320 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr502Q8VG09 314 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Dnajc24Q91ZF0 196 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Atg5Q99J83 275 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 GpnmbQ99P91 574 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Mrpl41Q9CQN7 135 aaKnown RBP9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Dph7Q9CYU6 477 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Lrrc51Q9DAK8 192 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Cmtm2aQ9DAR1 169 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Decr2Q9WV68 292 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tmem196V9GX04 182 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Zfyve26Q5DU37 2529 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm28870A0A0A6YW38 222 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Sirpb1bA0A0A6YXN8 397 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Gm5678A0A1B0GRG8 277 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Ldlrad3A2AR95 345 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr613E9PYB4 317 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr424E9Q0Q2 315 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Sirpb1cK7N6K7 397 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 P01795 144 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Itga5P11688 1053 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Tcte3P11985 191 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr13P34984 310 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Q149G0 166 aaKnown RBP9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Prss48Q14B25 312 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr1477Q7TQQ7 315 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Olfr198Q7TS40 306 aa9.79□□□□□ -0.84
Msh3-201ENSMUST00000022220 Bpifb3Q80ZU7 473 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms