RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 FAM166AQ6J272 317 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 OR2W3Q7Z3T1 314 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 SKA3Q8IX90 412 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 SEMA6DQ8NFY4 1073 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 OR51A4Q8NGJ6 313 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 FAM3DQ96BQ1 224 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF775Q96BV0 537 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-234ENST00000642041 RAB22AQ9UL26 194 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 MED12Q93074 2177 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 TRAV8-7A0A075B6U6 113 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 NAP1L6A6NFF2 107 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 INAFM1C9JVW0 142 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 H3BUI4 141 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 GABARAPH6UMI1 98 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 DVL2O14641 736 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 XRCC3O43542 346 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 ADRA2CP18825 462 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 TIMP3P35625 211 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 PMPCAQ10713 525 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 FAPQ12884 760 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 DYRK1AQ13627 763 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 GPR176Q14439 515 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 P2RY6Q15077 328 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 TAB1Q15750 504 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 HES5Q5TA89 166 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 Q6ZT83 130 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 OR14K1Q8NGZ2 314 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 OR10AC1Q8NH08 325 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 LGALS14Q8TCE9 139 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 APOBEC3DQ96AK3 386 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-234ENST00000642041 ZC3HAV1LQ96H79 300 aaKnown RBP14.92□□□□□ -0.02
PHGDH-234ENST00000642041 TRIB1Q96RU8 372 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 SDHCQ99643 169 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-234ENST00000642041 THAP7Q9BT49 309 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-234ENST00000642041 C1QTNF5Q9BXJ0 243 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 PLSCR4Q9NRQ2 329 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 RHBDL2Q9NX52 303 aa14.92□□□□□ -0.02
PHGDH-234ENST00000642041 SMIM30A4D0T7 59 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 MBD3L4A6NDZ8 208 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 MBD3L3A6NE82 208 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 MBD3L5A6NJ08 208 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 A6NNC1 897 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 RNF212BA8MTL3 300 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 PFDN1O60925 122 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 LCATP04180 440 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 CSF3P09919 207 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 SNRPBP14678 240 aaKnown RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 ALDH3B1P43353 468 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 KIR2DL3P43628 341 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 GUSBP1Q15486 140 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 TMEM69Q5SWH9 247 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 BEND4Q6ZU67 534 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 LINGO2Q7L985 606 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 BTLAQ7Z6A9 289 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 RPRMLQ8N4K4 120 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 CSNK2A3Q8NEV1 391 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 OR4M1Q8NGD0 313 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 OR1K1Q8NGR3 316 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 MBD3L2Q8NHZ7 208 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 SYNPRQ8TBG9 265 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 FCAMRQ8WWV6 532 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 TAS2R4Q9NYW5 299 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 OR5V1Q9UGF6 321 aa14.91□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF107Q9UII5 783 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-234ENST00000642041 TGM6O95932 706 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 PAHP00439 452 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 IL2RAP01589 272 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 EIF4EP06730 217 aaKnown RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 APLNRP35414 380 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 FAUP35544 74 aaKnown RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF93P35789 620 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 UBE2NP61088 152 aaKnown RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 RAB1AP62820 205 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 NKX6-1P78426 367 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 IFITM3Q01628 133 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 C2orf76Q3KRA6 126 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 ACSF3Q4G176 576 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 PABPC1L2AQ5JQF8 200 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 GLYATL3Q5SZD4 288 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 RTL6Q6ICC9 239 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 COLCA1Q6ZS62 124 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 KRT74Q7RTS7 529 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 NUFIP2Q7Z417 695 aaKnown RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 JAGN1Q8N5M9 183 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 DNAAF1Q8NEP3 725 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 KCNG3Q8TAE7 436 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 SPSB4Q96A44 273 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 S100A13Q99584 98 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 GFI1Q99684 422 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 CHST5Q9GZS9 411 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 CST11Q9H112 138 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 WNT5BQ9H1J7 359 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 SCPEP1Q9HB40 452 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 RBFOX1Q9NWB1 397 aaKnown RBP14.9□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF407Q9C0G0 2248 aa14.9□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF780AO75290 641 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-234ENST00000642041 WNT11O96014 354 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 GSG1Q2KHT4 349 aa14.89□□□□□ -0.03
PHGDH-234ENST00000642041 ZNF774Q6NX45 483 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms