RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PAGE2Q7Z2X7 111 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 ZFP62Q8NB50 900 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-211ENST00000638889 OR5AR1Q8NGP9 310 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 OR8K3Q8NH51 312 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 RSPH1Q8WYR4 309 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 RBPMSQ93062 196 aaKnown RBP0.93□□□□□ -2.26
CCDC7-211ENST00000638889 DYNLL2Q96FJ2 89 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 OR2S2Q9NQN1 319 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 COX16Q9P0S2 106 aa0.93□□□□□ -2.26
CCDC7-211ENST00000638889 STX18Q9P2W9 335 aaKnown RBP0.93□□□□□ -2.26
CCDC7-211ENST00000638889 CAB39Q9Y376 341 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-211ENST00000638889 UBN2Q6ZU65 1347 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 KMT2BQ9UMN6 2715 aaPredicted RBP0.92□□□□□ -2.26
CCDC7-211ENST00000638889 A0A1W2PNM2 257 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 TSPAN11A1L157 253 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 C9JVG2 144 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 RNF13O43567 381 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 FTH1P02794 183 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 CTSGP08311 255 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 CLTAP09496 248 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 EIF2S2P20042 333 aaKnown RBP0.92□□□□□ -2.26
CCDC7-211ENST00000638889 OTX1P32242 354 aaPredicted RBP0.92□□□□□ -2.26
CCDC7-211ENST00000638889 SERPINB8P50452 374 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 KDSRQ06136 332 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 HHATQ5VTY9 493 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 SLC22A9Q8IVM8 553 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 LRRC8AQ8IWT6 810 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 TTC29Q8NA56 475 aaPredicted RBP0.92□□□□□ -2.26
CCDC7-211ENST00000638889 ZNF606Q8WXB4 792 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 XPO6Q96QU8 1125 aaKnown RBP0.92□□□□□ -2.26
CCDC7-211ENST00000638889 PEBP4Q96S96 227 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 CES1P1Q9UKY3 287 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 ZNF337Q9Y3M9 751 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 ATAD2BQ9ULI0 1458 aa0.92□□□□□ -2.26
CCDC7-211ENST00000638889 TMEM72A0PK05 275 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 CCNB2O95067 398 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 OXTP01178 125 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 PRPS1L1P21108 318 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 RGS6P49758 472 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 HADHQ16836 314 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 MRPL2Q5T653 305 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 METAP1DQ6UB28 335 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 PDPNQ86YL7 162 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 RNF10Q8N5U6 811 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 EIF4E3Q8N5X7 224 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 AKR7LQ8NHP1 331 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 ITLN2Q8WWU7 325 aaPredicted RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 SNF8Q96H20 258 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 PRRC1Q96M27 445 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 ZNF75AQ96N20 296 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 C20orf166-AS1Q96NR2 134 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 ALS2CR12Q96Q35 445 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 DERL3Q96Q80 235 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 C20orf24Q9BUV8 137 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 NUP58Q9BVL2 599 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 CALN1Q9BXU9 219 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 FAM60AQ9NP50 221 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 TREX1Q9NSU2 369 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 RCL1Q9Y2P8 373 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 ZNF257Q9Y2Q1 563 aa0.91□□□□□ -2.26
CCDC7-211ENST00000638889 HELZ2Q9BYK8 2649 aaKnown RBP0.91□□□□□ -2.26
CCDC7-211ENST00000638889 GGTLC3B5MD39 225 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 CPLX1O14810 134 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 LSM1O15116 133 aaKnown RBP0.9□□□□□ -2.27
CCDC7-211ENST00000638889 ERI3O43414 337 aaKnown RBP0.9□□□□□ -2.27
CCDC7-211ENST00000638889 SLC19A2O60779 497 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 CDH16O75309 829 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 ENTPD6O75354 484 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 CDS2O95674 445 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 GTF2E2P29084 291 aaKnown RBP0.9□□□□□ -2.27
CCDC7-211ENST00000638889 RFC3P40938 356 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 OR1G1P47890 313 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 MAJINQ3KP22 176 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 PRAMEF20Q5VT98 475 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 SFXN5Q8TD22 340 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 YIPF6Q96EC8 236 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 TPD52L3Q96J77 140 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 GPR21Q99679 349 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 TBL1XR1Q9BZK7 514 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 UCK2Q9BZX2 261 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 SND1-IT1Q9HBX3 110 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 HEBP1Q9NRV9 189 aa0.9□□□□□ -2.27
CCDC7-211ENST00000638889 SIGLEC1Q9BZZ2 1709 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 CTNSO60931 367 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 OR2F2O95006 317 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 RAB5AP20339 215 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 CXCR1P25024 350 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 PRSS3P35030 304 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 ATP5G2Q06055 141 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 C2orf54Q08AI8 447 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 OR1Q1Q15612 314 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 TRMT5Q32P41 509 aaKnown RBP0.89□□□□□ -2.27
CCDC7-211ENST00000638889 WDR82Q6UXN9 313 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 ZYG11AQ6WRX3 759 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 VKORC1L1Q8N0U8 176 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 OR5P3Q8WZ94 311 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 RAB1CQ92928 201 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 C8orf44Q96CB5 159 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 RASD2Q96D21 266 aa0.89□□□□□ -2.27
CCDC7-211ENST00000638889 FAM19A4Q96LR4 140 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms