RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 GKN2Q86XP6 184 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 IP6K3Q96PC2 410 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 EIF5A2Q9GZV4 153 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 STRAPQ9Y3F4 350 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 SDCBPO00560 298 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 NQO2P16083 231 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 RAB2AP61019 212 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 COMMD2Q86X83 199 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 SPACA5Q96QH8 159 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 WWTR1Q9GZV5 400 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 COPS7AQ9UBW8 275 aa13.08□□□□□ -0.32
CACNA1A-220ENST00000635988 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 E5RGE8 158 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 CA11O75493 328 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 KNG1P01042 644 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 PTGER4P35408 488 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SULT1A1P50225 295 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 TLE3Q04726 772 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF542PQ5EBM4 170 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 TMPRSS9Q7Z410 1059 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 ABHD12BQ7Z5M8 362 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 C9orf40Q8IXQ3 194 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 PNLDC1Q8NA58 520 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 OR2AJ1Q8NGZ0 328 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 TSLPQ969D9 159 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SCRT1Q9BWW7 348 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 CHST11Q9NPF2 352 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 NSG2Q9Y328 171 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 DMRT1Q9Y5R6 373 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 GIMD1P0DJR0 217 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 IL11P20809 199 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 CAPZBP47756 277 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 CAMLGP49069 296 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 TMEM240Q5SV17 173 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SULF2Q8IWU5 870 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 FAM24BQ8N5W8 94 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 LFNGQ8NES3 379 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 ST8SIA1Q92185 356 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 FBXO17Q96EF6 278 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SLC35B3Q9H1N7 401 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SMDT1Q9H4I9 107 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 KLHL13Q9P2N7 655 aa13.07□□□□□ -0.32
CACNA1A-220ENST00000635988 hCG_1809904A0A1W2PP81 198 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1W2PR64 198 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1W2PRV1 198 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 B4DGG1 531 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 CTSDP07339 412 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 RPUSD3Q6P087 351 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 EDARADDQ8WWZ3 215 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 C5orf34Q96MH7 638 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 SMIM3Q9BZL3 60 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 RAB33BQ9H082 229 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 MED29Q9NX70 200 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 SPTY2D1-AS1A0A0U1RR47 76 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 APOBEC1P41238 236 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 C1orf61Q13536 156 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 THEM4Q5T1C6 240 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 GPR157Q5UAW9 335 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 DOK3Q7L591 496 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 FGF14Q92915 247 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 GINS3Q9BRX5 216 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 BCL2L14Q9BZR8 327 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 TOLLIPQ9H0E2 274 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 POLR1DQ9Y2S0 133 aa13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 LSM5Q9Y4Y9 91 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1B0GW64 132 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 RRP8O43159 456 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 NME2P1O60361 137 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 CCL1P22362 96 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 ALDH3B1P43353 468 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 BLKP51451 505 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 SLC35A1P78382 337 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 ACER2Q5QJU3 275 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 RNF144BQ7Z419 303 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 GPR84Q9NQS5 396 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1W2PP11 408 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 CRYM-AS1A6NIL9 109 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF729A6NN14 1252 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 P2RY1P47900 373 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 BIDP55957 195 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 GGNBP1Q5YKI7 109 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms