RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RNF166Q96A37 237 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-208ENST00000634934 OR10A2Q9H208 303 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 SLC22A13Q9Y226 551 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 STARD10Q9Y365 291 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
LINC00339-208ENST00000634934 CADP27708 2225 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 A0A0G2JK05 382 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ACOD1A6NK06 481 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 GSTZ1O43708 216 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 SMPD2O60906 423 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ALX3O95076 343 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ANOS1P23352 680 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 PITPNBP48739 271 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 NANOS3P60323 173 aaKnown RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 SNTB2Q13425 540 aaKnown RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ALKBH1Q13686 389 aaKnown RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 P2RY14Q15391 338 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 WDR38Q5JTN6 314 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 VHLLQ6RSH7 139 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 COLCA1Q6ZS62 124 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF767PQ75MW2 155 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 PRSS45Q7RTY3 260 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 SLC7A5P1Q8MH63 180 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 PRSS35Q8N3Z0 413 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 OR52H1Q8NGJ2 320 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 OR1J1Q8NGS3 322 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 PGLYRP3Q96LB9 341 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 HS3ST6Q96QI5 342 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 TMEM246Q9BRR3 403 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 MRI1Q9BV20 369 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 MOB1AQ9H8S9 216 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 RANGRFQ9HD47 186 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 G6PC2Q9NQR9 355 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 FRRS1LQ9P0K9 344 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 NUFIP1Q9UHK0 495 aaKnown RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 RNF115Q9Y4L5 304 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 ALG5Q9Y673 324 aa12.44□□□□□ -0.42
LINC00339-208ENST00000634934 SIRT4Q9Y6E7 314 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-208ENST00000634934 FBN2P35556 2912 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 CSMD1Q96PZ7 3565 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 TRBV2A0A0J9YWF9 115 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ARSBP15848 533 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ELK1P19419 428 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ERVS71-1P61550 626 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 PPP1CBP62140 327 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 PITPNAQ00169 270 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 MALLQ13021 153 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 DAZAP2Q15038 168 aaPredicted RBP12.43□□□□□ -0.42
LINC00339-208ENST00000634934 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 FDX2Q6P4F2 183 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 RPL22L1Q6P5R6 122 aaKnown RBP12.43□□□□□ -0.42
LINC00339-208ENST00000634934 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 OR5L1Q8NGL2 311 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 RFT1Q96AA3 541 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 BCL2L14Q9BZR8 327 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF319Q9P2F9 582 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ST6GALNAC2Q9UJ37 374 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 RBMX2Q9Y388 322 aaKnown RBP12.43□□□□□ -0.42
LINC00339-208ENST00000634934 CSMD2Q7Z408 3487 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 PKDREJQ9NTG1 2253 aa12.43□□□□□ -0.42
LINC00339-208ENST00000634934 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
LINC00339-208ENST00000634934 ANKRD34BA5PLL1 514 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 A6NNC1 897 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 CYSRT1A8MQ03 144 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 SHISA9B4DS77 424 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 INMT-MINDY4F8WBC2 141 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 GPRIN2O60269 458 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ICMTO60725 284 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 SNAPC5O75971 98 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 PLAUP00749 431 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 RCVRNP35243 200 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 MMP15P51511 669 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 SLC3A1Q07837 685 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 CDK5R1Q15078 307 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 GLYATL3Q5SZD4 288 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 THOC7Q6I9Y2 204 aaKnown RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 NR2C2APQ86WQ0 139 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 AKAP1Q92667 903 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00339-208ENST00000634934 MARVELD3Q96A59 401 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 POFUT1Q9H488 388 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 EXTL2Q9UBQ6 330 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 NOTOA8MTQ0 251 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 H3BSH0 61 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 J3QW42 95 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 P2RY10O00398 339 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 XRCC2O43543 280 aa12.42□□□□□ -0.42
LINC00339-208ENST00000634934 TTRP02766 147 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms