RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PTTG3PQ9NZH4 202 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 LOC100289279A0A1B0GTE1 492 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 BDKRB2P30411 391 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 GNG2P59768 71 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 PRSS45Q7RTY3 260 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 C20orf196Q8IYI0 205 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 LINC01560Q8TB33 94 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 WBP1Q96G27 269 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 AUNIPQ9H7T9 357 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 GPR160Q9UJ42 338 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 G3V3Q6 166 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 GIFP27352 417 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 RIPPLY2Q5TAB7 128 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 ABLIM2Q6H8Q1 611 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 PGAP1Q75T13 922 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 TMEM200AQ86VY9 491 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 CCDC54Q8NEL0 328 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC30A7Q8NEW0 376 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 AMELYQ99218 206 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR51J1Q9H342 316 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLA2Q9H6Q3 261 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 ESRP2Q9H6T0 727 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 FOXJ3Q9UPW0 622 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 MEMO1Q9Y316 297 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF716A6NP11 495 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 CREBL2O60519 120 aaPredicted RBP10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 Q6ZT83 130 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR5AS1Q8N127 324 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR1F12Q8NHA8 337 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 NEK7Q8TDX7 302 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SMIM4Q8WVI0 70 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 DEDD2Q8WXF8 326 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 FAM3DQ96BQ1 224 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 VRK1Q99986 396 aaPredicted RBP10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 B3GAT1Q9P2W7 334 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 DOPEY2Q9Y3R5 2298 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 ANKRD30BLA7E2S9 258 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 AKAIN1P0CW23 69 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PSMB1P20618 241 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 TIMP3P35625 211 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR3A3P47888 321 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PTH2RP49190 550 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PLA2G7Q13093 441 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 SFRP4Q6FHJ7 346 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 BIVMQ86UB2 503 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PRSS35Q8N3Z0 413 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PIGCQ92535 297 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 FBXO17Q96EF6 278 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CST11Q9H112 138 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 A0A0G2JNJ9 132 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 AKR7A2O43488 359 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 TCRBP04435 133 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 ASCL1P50553 236 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 TSPAN5P62079 268 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 MRPS34P82930 218 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 WDFY1Q8IWB7 410 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CCDC36Q8IYA8 594 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR1J1Q8NGS3 322 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 S100PBPQ96BU1 408 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PAPOLGQ9BWT3 736 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 BCO1Q9HAY6 547 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 Q9UFV3 132 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 AMDHD2Q9Y303 409 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR6C6A6NF89 314 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 NPIPB13A6NJU9 1138 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 NPIPB4C9JG80 1138 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CSTBP04080 98 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CD3EP07766 207 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CFPP27918 469 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 CLDN12P56749 244 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 RPS23P62266 143 aaKnown RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PCGF3Q3KNV8 242 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 C4orf46Q504U0 113 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 MDP1Q86V88 176 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF431Q8TF32 576 aaPredicted RBP10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 ADGRG7Q96K78 797 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 USF3Q68DE3 2245 aa10.88□□□□□ -0.67
SYNGAP1-207ENST00000628646 TRBV5-7A0A0A0MS05 114 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 P2RY10O00398 339 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF780AO75290 641 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 HRGP04196 525 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 POU3F4P49335 361 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 FCN2Q15485 313 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 PIK3IP1Q96FE7 263 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 CLCF1Q9UBD9 225 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR4C45A6NMZ5 311 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 CXCL3P19876 107 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 KIR2DL2P43627 348 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 MEX3BQ6ZN04 569 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR10AC1Q8NH08 325 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF519Q8TB69 540 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 RNF138Q8WVD3 245 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF837Q96EG3 531 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms