RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-208	ENST00000626874	FZD6	O60353	706 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	CIDEA	O60543	219 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	PFN3	P60673	137 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	AMIGO3	Q86WK7	504 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	NFAM1	Q8NET5	270 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	OR10K1	Q8NGX5	313 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	OR51E1	Q8TCB6	317 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874		Q8WTZ3	238 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	C10orf35	Q96D05	121 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ZNF426	Q9BUY5	554 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	CGGBP1	Q9UFW8	167 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	MOB4	Q9Y3A3	225 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	DOCK1	Q14185	1865 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	C5	P01031	1676 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	WNT9B	O14905	357 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	DIO1	P49895	249 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ERVFC1-1	P60608	527 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	COMMD1	Q8N668	190 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	RAB40C	Q96S21	281 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	POMT1	Q9Y6A1	747 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	AHCTF1	Q8WYP5	2266 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ALOX5AP	P20292	161 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	NME2	P22392	152 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	FCGR2C	P31995	323 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	PTGFR	P43088	359 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	GPM6A	P51674	278 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ACER2	Q5QJU3	275 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ACOT7L	Q6ZUV0	252 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	MARCH1	Q8TCQ1	289 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	RSRP1	Q9BUV0	290 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SRR	Q9GZT4	340 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SLC17A5	Q9NRA2	495 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	DCAF16	Q9NXF7	216 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	NTNG1	Q9Y2I2	539 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SNX11	Q9Y5W9	270 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ARL2-SNX15	V9GYD0	113 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SS18L1	O75177	396 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ST6GAL1	P15907	406 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	VDAC1	P21796	283 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	PPP1CB	P62140	327 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	BTN1A1	Q13410	526 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ZNF787	Q6DD87	383 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	OR2W3	Q7Z3T1	314 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	DUSP18	Q8NEJ0	188 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	FGF11	Q92914	225 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SARG	Q9BW04	601 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	MED20	Q9H944	212 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	COA4	Q9NYJ1	87 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	PSORS1C1	Q9UIG5	152 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	GDF2	Q9UK05	429 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	MMP7	P09237	267 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	GIP	P09681	153 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SNRPB	P14678	240 aa	Known RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	CEACAM16	Q2WEN9	425 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	OR4S1	Q8NGB4	309 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ZNF596	Q8TC21	504 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	TAS2R4	Q9NYW5	299 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874		A0A1W2PPC1	479 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ZNF17	P17021	662 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	CASP3	P42574	277 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	EBLN2	Q6P2I7	272 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	WDR73	Q6P4I2	378 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	WDR74	Q6RFH5	385 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	REC114	Q7Z4M0	266 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	LINC00596	Q86U02	117 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	LSMEM1	Q8N8F7	131 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SLC16A11	Q8NCK7	471 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ADPRHL1	Q8NDY3	354 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	OR4A4P	Q8NGN8	299 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	C16orf52	Q8NHV5	167 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	EMC6	Q9BV81	110 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	LYRM2	Q9NU23	88 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	NPIPB6	E9PJ23	425 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	HAX1	O00165	279 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	GNG7	O60262	68 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SELENOF	O60613	162 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	GHRH	P01286	108 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	B4GALT1	P15291	398 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	ERVFRD-1	P60508	538 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	LSM11	P83369	360 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SLC17A1	Q14916	467 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	TMEM268	Q5VZI3	342 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SSX7	Q7RTT5	188 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	SH2D2A	Q9NP31	389 aa		6.22	□□□□□ -1.41
CHD2-208	ENST00000626874	IGHV3-20	A0A0C4DH32	117 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	ALG1L2	C9J202	215 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874		M0R1X1	148 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	DEDD	O75618	318 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	ALPL	P05186	524 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	PCSK6	P29122	969 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	CD200	P41217	278 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	RPL35	P42766	123 aa	Known RBP	6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	ZNF121	P58317	390 aa	Predicted RBP	6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	RPL18	Q07020	188 aa	Known RBP	6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	DEGS2	Q6QHC5	323 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	ARRDC1	Q8N5I2	433 aa		6.21	□□□□□ -1.41
CHD2-208	ENST00000626874	NTNG2	Q96CW9	530 aa		6.21	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms