RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 FZD5Q13467 585 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 ZNF626Q68DY1 528 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 LAIR2Q6ISS4 152 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 ATG4DQ86TL0 474 aaPredicted RBP14.42□□□□□ -0.1
GABRB3-215ENST00000622697 THNSL2Q86YJ6 484 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 ZDHHC23Q8IYP9 409 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 FOXB1Q99853 325 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 FAAP24Q9BTP7 215 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 C19orf12Q9NSK7 152 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 PLA2G3Q9NZ20 509 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 TRAV8-7A0A075B6U6 113 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 INHBBP09529 407 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 PSMB3P49720 205 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 ARHGEF39Q8N4T4 335 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 DEFB108BQ8NET1 73 aa14.42□□□□□ -0.1
GABRB3-215ENST00000622697 PATZ1Q9HBE1 687 aaKnown RBP14.42□□□□□ -0.1
GABRB3-215ENST00000622697 CST7O76096 145 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 C1orf53Q5VUE5 145 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ZNF770Q6IQ21 691 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 CRISPLD2Q9H0B8 497 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 RCL1Q9Y2P8 373 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ZNF638Q14966 1978 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 TDRD15B5MCY1 1934 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 RRASP10301 218 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 CLEC12BQ2HXU8 276 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 OR5AP2Q8NGF4 316 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 RXFP4Q8TDU9 374 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 NIT2Q9NQR4 276 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ZNF275Q9NSD4 429 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 HIST1H1DP16402 221 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 OR2V1Q8NHB1 315 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 KCNE4Q8WWG9 221 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 UBL7Q96S82 380 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 H7C1Q1 480 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 CD37P11049 281 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 SLC25A30Q5SVS4 291 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ZNF774Q6NX45 483 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 SEZ6L2Q6UXD5 910 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 AKR1E2Q96JD6 320 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 THBS4P35443 961 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 OR11L1Q8NGX0 322 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 OR1F12Q8NHA8 337 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 INTS12Q96CB8 462 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ARRDC1-AS1Q9H2J1 176 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 ESRP2Q9H6T0 727 aaKnown RBP14.41□□□□□ -0.1
GABRB3-215ENST00000622697 PRELID3BQ9Y3B1 194 aa14.41□□□□□ -0.1
GABRB3-215ENST00000622697 OR8U8P0C7N1 319 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CT45A8P0DMV1 189 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CT45A9P0DMV2 189 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CT45A2Q5DJT8 189 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 LHX9Q9NQ69 397 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 BRWD3Q6RI45 1802 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 MYO16Q9Y6X6 1858 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 C9orf170A2RU37 121 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 SERPINE3A8MV23 424 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 TRIM77I1YAP6 450 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 ONECUT2O95948 504 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 GLAP06280 429 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 PTGFRP43088 359 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 OR2W3Q7Z3T1 314 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 FAM219AQ8IW50 185 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 FUT5Q11128 374 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CDC20BQ86Y33 519 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 LSMEM1Q8N8F7 131 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 PLPPR2Q96GM1 343 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 LSM2Q9Y333 95 aaKnown RBP14.4□□□□□ -0.1
GABRB3-215ENST00000622697 A0A087WZY1 265 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 IGKV1D-16P01601 117 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CTXN2P0C2S0 81 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CCL2P13500 99 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 ARRDC1Q8N5I2 433 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 BPIFCQ8NFQ6 507 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 CXorf58Q96LI9 332 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 PLEKHA2Q9HB19 425 aa14.4□□□□□ -0.1
GABRB3-215ENST00000622697 A0A1W2PR80 420 aa14.4□□□□□ -0.11
GABRB3-215ENST00000622697 HNF1AP20823 631 aa14.4□□□□□ -0.11
GABRB3-215ENST00000622697 FABP6P51161 128 aa14.4□□□□□ -0.11
GABRB3-215ENST00000622697 PNLIPRP3Q17RR3 467 aa14.4□□□□□ -0.11
GABRB3-215ENST00000622697 HIST2H3AQ71DI3 136 aa14.4□□□□□ -0.11
GABRB3-215ENST00000622697 AQP7O14520 342 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 SH2D1BO14796 132 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 TMEM127O75204 238 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 RD3LP0DJH9 198 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PRAMEF5Q5TYX0 476 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PRAMEF6Q5VXH4 476 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PRSS42Q7Z5A4 293 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 LFNGQ8NES3 379 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PP6455Q8WZ26 134 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 MDFIC2A0A1B0GVS7 189 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 RAG2P55895 527 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 SLC37A1P57057 533 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 RPS16P62249 146 aaKnown RBP14.39□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF239Q16600 458 aaKnown RBP14.39□□□□□ -0.11
GABRB3-215ENST00000622697 ALKBH6Q3KRA9 238 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF573Q86YE8 665 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 SCCPDHQ8NBX0 429 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 SLC17A5Q9NRA2 495 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 OSGIN2Q9Y236 505 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 A0A1W2PQF6 199 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms