RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OR52N4Q8NGI2 321 aa4.53□□□□□ -1.69
VPS13D-214ENST00000620676 IL21Q9HBE4 155 aa4.53□□□□□ -1.69
VPS13D-214ENST00000620676 H3BMH7 237 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GSTZ1O43708 216 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GOSR1O95249 250 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MPZL1O95297 269 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF43P17038 809 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ACTR3CQ9C0K3 210 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 FNDC4Q9H6D8 234 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PLEKHF2Q9H8W4 249 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM30AQ9NV96 361 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 LRP6O75581 1613 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PTGESO14684 152 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CEBPDP49716 269 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SSX8Q7RTT4 187 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MRGPREQ86SM8 312 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR5C1Q8NGR4 320 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SOCS4Q8WXH5 440 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MRIQ9BWK5 157 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 NKX2-4Q9H2Z4 354 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 LOC107986453A0A1B0GWG9 222 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR7C1O76099 320 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 APCSP02743 223 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PLP1P60201 277 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SRSF5Q13243 272 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CDCP2Q5VXM1 449 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MRPL54Q6P161 138 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 LURAP1LQ8IV03 231 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC22A24Q8N4F4 322 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR52L2PQ8NGH6 319 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 KLK13Q9UKR3 277 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TNFSF18Q9UNG2 199 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PLPP1O14494 284 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 WNT11O96014 354 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR5AC1P0C628 307 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF17P17021 662 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SMAGPQ0VAQ4 97 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 DUSP5Q16690 384 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 KIAA1644Q3SXP7 199 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC39A5Q6ZMH5 540 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PRRX2Q99811 253 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 NDUFS8O00217 210 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CD33P20138 364 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF137PP52743 207 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR10AC1Q8NH08 325 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SPIN2AQ99865 258 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SPIN2BQ9BPZ2 258 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MTIF3Q9H2K0 278 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PIPOXQ9P0Z9 390 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CA11O75493 328 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CSNK1A1P48729 337 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TAS2R30P59541 319 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CYHR1Q6ZMK1 362 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ABHD5Q8WTS1 349 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 C6orf106Q9H6K1 298 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 UTS2O95399 124 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HPRT1P00492 218 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CDAP32320 146 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GPX4P36969 197 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TNFSF10P50591 281 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HLA-DRB5Q30154 266 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 STACQ99469 402 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC45A2Q9UMX9 530 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PMS2P1A4D2B8 440 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 EFSO43281 561 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SPRY1O43609 319 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MMDQ15546 238 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC39A7Q92504 469 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GTF3AQ92664 365 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CAPNS2Q96L46 248 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GPHA2Q96T91 129 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF426Q9BUY5 554 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GPR62Q9BZJ7 368 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GLRX2Q9NS18 164 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TRAV8-7A0A075B6U6 113 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 C17orf105B2RV13 164 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CXCL11O14625 94 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SFT2D2O95562 160 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TIMP1P01033 207 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 UCP2P55851 309 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 RPEL1Q2QD12 228 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SAMD13Q5VXD3 122 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ARRDC1Q8N5I2 433 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 NUDT11Q96G61 164 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CTDSP1Q9GZU7 261 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 KCNIP2Q9NS61 270 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 FGF5P12034 268 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF266Q14584 549 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 NSDHLQ15738 373 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 RABEPKQ7Z6M1 372 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 EIF4E3Q8N5X7 224 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR1L3Q8NH93 324 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HGDQ93099 445 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MYO5AQ9Y4I1 1855 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GUSBP08236 651 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms