RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TMEM42Q69YG0 159 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 P4HA3Q7Z4N8 544 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 TRAPPC6BQ86SZ2 158 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 ZNF584Q8IVC4 421 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 OR11H7Q8NGC8 314 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 MED30Q96HR3 178 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 GINS4Q9BRT9 223 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 FREM1Q5H8C1 2179 aa16.54■□□□□ 0.24
PSPC1-206ENST00000619300 ZNF503-AS2A6NEH8 195 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 SOCS1O15524 211 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 CD74P04233 296 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 PRKACBP22694 351 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 MPGP29372 298 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 RAD52P43351 418 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 MTCP1P56278 107 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 RAB1AP62820 205 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 LIX1LQ8IVB5 337 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 FAM89BQ8N5H3 189 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 OR56B1Q8NGI3 324 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 RAB3CQ96E17 227 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 S100A13Q99584 98 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 NPDC1Q9NQX5 325 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 GLRX2Q9NS18 164 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 PYCARD-AS1I3L0S3 204 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 AQP7O14520 342 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 SSNA1O43805 119 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 WISP2O76076 250 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 NRASP01111 189 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 C1QBP02746 253 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 IL5P05113 134 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 ANXA7P20073 488 aaKnown RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 OR3A2P47893 321 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 PRSS12P56730 875 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 RPS27AP62979 156 aaKnown RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 MRPS15P82914 257 aaKnown RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 CNN3Q15417 329 aaKnown RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 OR8B8Q15620 311 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 PLAC9Q5JTB6 97 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 GLDNQ6ZMI3 551 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 PIAS4Q8N2W9 510 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-206ENST00000619300 ZADH2Q8N4Q0 377 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 CLCF1Q9UBD9 225 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 GVINP1Q7Z2Y8 2422 aa16.53■□□□□ 0.24
PSPC1-206ENST00000619300 C5orf49A4QMS7 147 aa16.52■□□□□ 0.24
PSPC1-206ENST00000619300 IL18BPO95998 194 aa16.52■□□□□ 0.24
PSPC1-206ENST00000619300 GSTP1P09211 210 aaKnown RBP16.52■□□□□ 0.24
PSPC1-206ENST00000619300 TMEM50BP56557 158 aa16.52■□□□□ 0.24
PSPC1-206ENST00000619300 OR51T1Q8NGJ9 327 aa16.52■□□□□ 0.24
PSPC1-206ENST00000619300 NUDCD2Q8WVJ2 157 aa16.52■□□□□ 0.24
PSPC1-206ENST00000619300 CPNE2Q96FN4 548 aaPredicted RBP16.52■□□□□ 0.24
PSPC1-206ENST00000619300 TINAGL1Q9GZM7 467 aaPredicted RBP16.52■□□□□ 0.24
PSPC1-206ENST00000619300 M0QYG6 137 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 SS18L1O75177 396 aaPredicted RBP16.52■□□□□ 0.23
PSPC1-206ENST00000619300 SULT1A3P0DMM9 295 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 SULT1A4P0DMN0 295 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 HIST1H1DP16402 221 aaKnown RBP16.52■□□□□ 0.23
PSPC1-206ENST00000619300 MGMTP16455 207 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 CCNOP22674 350 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 ZP1P60852 638 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 DPPA2Q7Z7J5 298 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 OR1K1Q8NGR3 316 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 BCL2L2Q92843 193 aaPredicted RBP16.52■□□□□ 0.23
PSPC1-206ENST00000619300 TRAF4Q9BUZ4 470 aaPredicted RBP16.52■□□□□ 0.23
PSPC1-206ENST00000619300 ZNF222Q9UK12 451 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 KCNK7Q9Y2U2 307 aa16.52■□□□□ 0.23
PSPC1-206ENST00000619300 FAM230AA0A1W2PPH8 454 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 TMEM225BP0DP42 221 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 CCL2P13500 99 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 CXCL3P19876 107 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 ERP29P30040 261 aaKnown RBP16.51■□□□□ 0.23
PSPC1-206ENST00000619300 GZMKP49863 264 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 PLP2Q04941 152 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 RTN4RL2Q86UN3 420 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 STEAP2Q8NFT2 490 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 OR4S1Q8NGB4 309 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 OR10K1Q8NGX5 313 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 CAPSLQ8WWF8 208 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 SEC22CQ9BRL7 303 aa16.51■□□□□ 0.23
PSPC1-206ENST00000619300 ELL3Q9HB65 397 aaPredicted RBP16.51■□□□□ 0.23
PSPC1-206ENST00000619300 GPN1Q9HCN4 374 aaPredicted RBP16.51■□□□□ 0.23
PSPC1-206ENST00000619300 SSX5O60225 188 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 AMY2AP04746 511 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 ZNF735P0CB33 412 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 SERPINA2P20848 420 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 RBP2P50120 134 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 GNG2P59768 71 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 HIKESHIQ53FT3 197 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 ZBTB37Q5TC79 503 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 IGFL3Q6UXB1 125 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 LHFPL2Q6ZUX7 228 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 GVQW1Q8N7I0 195 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 POM121L2Q96KW2 1035 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 TRIB1Q96RU8 372 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 TMEM165Q9HC07 324 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 IFT46Q9NQC8 304 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 ZNF816-ZNF321PA0A0X1KG74 233 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 SNRPGP15A8MWD9 76 aa16.5■□□□□ 0.23
PSPC1-206ENST00000619300 KLK10O43240 276 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms