RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 ZNF676Q8N7Q3 588 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 DEFB108BQ8NET1 73 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 CLDND2Q8NHS1 167 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 ITPKCQ96DU7 683 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 C18orf12Q96KH6 178 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 ZNF488Q96MN9 340 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 OR5M11Q96RB7 305 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 RGCCQ9H4X1 137 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 OPA3Q9H6K4 179 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 PLEKHA1Q9HB21 404 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 RAB26Q9ULW5 256 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 EXOSC1Q9Y3B2 195 aaKnown RBP10.28□□□□□ -0.76
LINC00963-212ENST00000608669 V9GYS6 101 aa10.28□□□□□ -0.76
LINC00963-212ENST00000608669 YLPM1P49750 1951 aaKnown RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 TRBV2A0A0J9YWF9 115 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 ZNF816-ZNF321PA0A0X1KG74 233 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 RHBDL1O75783 438 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 ZFPL1O95159 310 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CDK1P06493 297 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 TACSTD2P09758 323 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CSF3P09919 207 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 PIPP12273 146 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 USF1P22415 310 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CFL1P23528 166 aaKnown RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CD200P41217 278 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 HSPA13P48723 471 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 GBX2P52951 348 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CDH15P55291 814 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 SEC61A1P61619 476 aaKnown RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 RIPPLY1Q0D2K3 151 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 ZNF154Q13106 437 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 ZMYND11Q15326 602 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 DOK3Q7L591 496 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 SYS1Q8N2H4 156 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 OR1M1Q8NGA1 313 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 OR13C3Q8NGS6 347 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 TSEN15Q8WW01 171 aaKnown RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 OR5P3Q8WZ94 311 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 RFT1Q96AA3 541 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 FGGYQ96C11 551 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 RNF170Q96K19 258 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 SPACA5Q96QH8 159 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 DIRC2Q96SL1 478 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 JAM3Q9BX67 310 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 INPP5EQ9NRR6 644 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 PLCXD1Q9NUJ7 323 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 CNOT2Q9NZN8 540 aaKnown RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 ENPP5Q9UJA9 477 aa10.27□□□□□ -0.77
LINC00963-212ENST00000608669 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
LINC00963-212ENST00000608669 A0A1B0GW55 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 A0A1B0GWJ7 208 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 FAM230AA0A1W2PPH8 454 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 A0A1W2PPK0 400 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 ACOD1A6NK06 481 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 ANXA2P2A6NMY6 339 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 ZNF732B4DXR9 585 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 FAM157AC9JC47 383 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 TMEM178BH3BS89 294 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CDIPTO14735 213 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 GMDSO60547 372 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 NRASP01111 189 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 UBCP0CG48 685 aaKnown RBP10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L2P0CJ85 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L3P0CJ86 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L4P0CJ87 422 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L5P0CJ88 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L6P0CJ89 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L7P0CJ90 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 SLC25A16P16260 332 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 TNFRSF1AP19438 455 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CCL1P22362 96 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CRHBPP24387 322 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 GIFP27352 417 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DSCR9P59020 149 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 SLC35A2P78381 396 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 INSL4Q14641 139 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CDK5R1Q15078 307 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 UBE2V2Q15819 145 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4L9Q6RFH8 374 aaPredicted RBP10.26□□□□□ -0.77
LINC00963-212ENST00000608669 TMPRSS11AQ6ZMR5 421 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 C11orf53Q8IXP5 236 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 FGFRL1Q8N441 504 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 PLPP7Q8NBV4 271 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CSNK2A3Q8NEV1 391 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 OR5AK2Q8NH90 309 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 LRRC29Q8WV35 223 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 GAL3ST1Q99999 423 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 WDR13Q9H1Z4 485 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 MYOZ1Q9NP98 299 aaPredicted RBP10.26□□□□□ -0.77
LINC00963-212ENST00000608669 SNTG1Q9NSN8 517 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CHCHD3Q9NX63 227 aaKnown RBP10.26□□□□□ -0.77
LINC00963-212ENST00000608669 SCN3BQ9NY72 215 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 DUX4Q9UBX2 424 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 CAB39Q9Y376 341 aaPredicted RBP10.26□□□□□ -0.77
LINC00963-212ENST00000608669 NPTNQ9Y639 398 aa10.26□□□□□ -0.77
LINC00963-212ENST00000608669 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
LINC00963-212ENST00000608669 IRGMA1A4Y4 181 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms