RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 ACTG2P63267 376 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ACTC1P68032 377 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ACTA1P68133 377 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 SLC35B1P78383 322 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 PITPNAQ00169 270 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 SLC25A11Q02978 314 aaKnown RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 CHRNB3Q05901 458 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ZNF146Q15072 292 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 TAL2Q16559 108 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 FAM53AQ6NSI3 398 aaPredicted RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 UFSP1Q6NVU6 142 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ACOT7LQ6ZUV0 252 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ZNF771Q7L3S4 317 aaPredicted RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 FUNDC1Q8IVP5 155 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 PRR22Q8IZ63 422 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 VKORC1L1Q8N0U8 176 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 PUSL1Q8N0Z8 303 aaKnown RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 LMO3Q8TAP4 145 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ZNF564Q8TBZ8 553 aaPredicted RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 TFB1MQ8WVM0 346 aaKnown RBP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 TAF15Q92804 592 aaKnown RBP eCLIP3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ZNF524Q96C55 264 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 SLC25A38Q96DW6 304 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 AGMATQ9BSE5 352 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 NMUR2Q9GZQ4 415 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 LHX5Q9H2C1 402 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 PARLQ9H300 379 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 CTPS2Q9NRF8 586 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 IL37Q9NZH6 218 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 TMEM181Q9P2C4 612 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ASIC3Q9UHC3 531 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 COQ4Q9Y3A0 265 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 AUP1Q9Y679 476 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 BSNQ9UPA5 3926 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 PTPRJQ12913 1337 aa3.09□□□□□ -1.91
IGHV3-29-201ENST00000604817 ANKRD20A5PA0PJZ0 165 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 HACD1B0YJ81 288 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 G3V3Y1 287 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SMKR1H3BMG3 65 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SLC17A2O00624 439 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SULT1B1O43704 296 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 AQP8O94778 261 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 TNFSF15O95150 251 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 TNFAIP8O95379 198 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 IGHV4-34P06331 123 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SERPINA6P08185 405 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 H2AFZP0C0S5 128 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 ZDHHC11BP0C7U3 371 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 UCHL3P15374 230 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 HLA-GP17693 338 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 PRKACGP22612 351 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 LMO2P25791 158 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RBM34P42696 430 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RPL29P47914 159 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 CSNK1DP48730 415 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 NDUFV3P56181 108 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 NANOS2P60321 138 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SRPXP78539 464 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 CYCSP99999 105 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 ABRAXAS2Q15018 415 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 PARP15Q460N3 678 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 CCDC14Q49A88 953 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 KLF17Q5JT82 389 aaPredicted RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 KHDRBS2Q5VWX1 349 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 DUPD1Q68J44 220 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SLC35E4Q6ICL7 350 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SPOPLQ6IQ16 392 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 PRSS57Q6UWY2 283 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 Q6ZSR9 355 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 LRRTM1Q86UE6 522 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 CBLN2Q8IUK8 224 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 C9orf40Q8IXQ3 194 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SLC25A45Q8N413 288 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 FTMTQ8N4E7 242 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 TMEM156Q8N614 296 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 LRRC52Q8N7C0 313 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 ZNF738Q8NE65 137 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 DUSP18Q8NEJ0 188 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 OR8K1Q8NGG5 319 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 OR6K6Q8NGW6 343 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 OR2L2Q8NH16 312 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 OR4C6Q8NH72 309 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 NDRG1Q92597 394 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 ATXN7L3BQ96GX2 97 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 ANKRD36BP1Q96IX9 119 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RARRES2Q99969 163 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 MICU1Q9BPX6 476 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 KCTD14Q9BQ13 255 aaPredicted RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 APOL2Q9BQE5 337 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SYT15Q9BQS2 421 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RSG1Q9BU20 258 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RNF126Q9BV68 326 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 CLEC7AQ9BXN2 247 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 RNF167Q9H6Y7 350 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SP140LQ9H930 580 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SIAEQ9HAT2 523 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 MRM3Q9HC36 420 aaKnown RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 NLE1Q9NVX2 485 aaPredicted RBP3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 SLC25A37Q9NYZ2 338 aa3.08□□□□□ -1.92
IGHV3-29-201ENST00000604817 Q9UF83 564 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms