RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 SEMA6DQ8NFY4 1073 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 GGHQ92820 318 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF665Q9H7R5 613 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 TMEM165Q9HC07 324 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 PLCXD1Q9NUJ7 323 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 FKBP14Q9NWM8 211 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 GTF2A1LQ9UNN4 478 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 OR4C45A6NMZ5 311 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 DHRS7CA6NNS2 312 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 J3QLW9 94 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 TNFRSF13BO14836 293 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF205O95201 554 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF19P17023 458 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 ACTA2P62736 377 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 ACTG2P63267 376 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 CSNK2BP67870 215 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 THAP5Q7Z6K1 395 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 RDH10Q8IZV5 341 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 GCSAMQ8N6F7 178 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 PIGCQ92535 297 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 DIMT1Q9UNQ2 313 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 PIGLQ9Y2B2 252 aa16.35■□□□□ 0.21
SHKBP1-221ENST00000599833 C3orf80F5H4A9 247 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 XPNPEP2O43895 674 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 ISG15P05161 165 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 GRPP07492 148 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 PIPP12273 146 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 EGR1P18146 543 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 CCR9P51686 369 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 RIPPLY1Q0D2K3 151 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 SNCBQ16143 134 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 ODF4Q2M2E3 257 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 DMRTC1Q5HYR2 192 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 DOK3Q7L591 496 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 FAM220AQ7Z4H9 259 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 ZDHHC23Q8IYP9 409 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 OR10AC1Q8NH08 325 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 RPS4Y2Q8TD47 263 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 TIMD4Q96H15 378 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 VCXQ9H320 206 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 METTL17Q9H7H0 456 aaPredicted RBP16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 C1orf123Q9NWV4 160 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 CLEC2DQ9UHP7 191 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 PSORS1C1Q9UIG5 152 aa16.34■□□□□ 0.21
SHKBP1-221ENST00000599833 LOC107986453A0A1B0GWG9 222 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 A6NIN4 97 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 DCKP27707 260 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 CFHR2P36980 270 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 SEC61A1P61619 476 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 CEACAM21Q3KPI0 293 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 ZNF404Q494X3 552 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 XAF1Q6GPH4 301 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 WDR82Q6UXN9 313 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 C19orf18Q8NEA5 215 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 OR51A4Q8NGJ6 313 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 OR8S1Q8NH09 359 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 FN3KRPQ9HA64 309 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 PATZ1Q9HBE1 687 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 ABCB9Q9NP78 766 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 C14orf119Q9NWQ9 140 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 DOCK11Q5JSL3 2073 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 WNK2Q9Y3S1 2297 aa16.33■□□□□ 0.2
SHKBP1-221ENST00000599833 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 H0YHG0 523 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 H3BSH0 61 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 MTRF1O75570 445 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 FCN3O75636 299 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 LALBAP00709 142 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 UBCP0CG48 685 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 MYF6P23409 242 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 GNALP38405 381 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 ALKBH1Q13686 389 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 CEP78Q5JTW2 689 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 OR2G6Q5TZ20 316 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 COMMD2Q86X83 199 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 FTMTQ8N4E7 242 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 GAL3ST1Q99999 423 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 MICU1Q9BPX6 476 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 TMEM246Q9BRR3 403 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 ANKRD60Q9BZ19 345 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 OR51I2Q9H344 312 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 YAE1D1Q9NRH1 226 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 TMEM160Q9NX00 188 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 CNOT2Q9NZN8 540 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 RNF7Q9UBF6 113 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 ENPP5Q9UJA9 477 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 PCDHGB5Q9Y5G0 923 aa16.32■□□□□ 0.2
SHKBP1-221ENST00000599833 CEACAM18A8MTB9 384 aa16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 A8MV72 311 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 KIAA1324LA8MWY0 1029 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 HTR1AP08908 422 aa16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 ZFP36P26651 326 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 MDH2P40926 338 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 GTF2A1P52655 376 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 MZT1Q08AG7 82 aa16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 IZUMO2Q6UXV1 221 aa16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 PEG10Q86TG7 708 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-221ENST00000599833 RGP1Q92546 391 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms